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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
335
ChIP-seq
Assay category
335
DNA binding
Target of assay
244
transcription factor
91
histone
91
histone modification
71
control
66
recombinant protein
50
broad histone mark
41
narrow histone mark
37
RNA binding protein
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
332
November, 2017
246
August, 2017
203
October, 2019
156
May, 2021
97
May, 2019
73
December, 2017
66
April, 2019
64
November, 2018
45
October, 2018
40
May, 2024
32
September, 2018
31
August, 2021
28
December, 2018
27
May, 2020
23
June, 2019
21
January, 2019
16
February, 2018
12
October, 2017
November, 2019
5
February, 2021
3
March, 2020
Available data
321
bam
318
bigWig
313
bed narrowPeak
309
bigBed narrowPeak
262
fastq
70
bed broadPeak
67
tagAlign
64
bigBed broadPeak
3
tar
Organism
335
Homo sapiens
Biosample type
257
cell line
72
tissue
6
primary cell
Organ
256
liver
76
brain
5
epithelium
4
vasculature
3
pancreas
2
blood vessel
Project
332
AMP
3
T1D
Genome assembly (visualization)
280
GRCh38
265
hg19
Lab
335
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
Audit category:
10
missing controlled_by
Audit category:
21
inconsistent control read length
4
inconsistent control run_type
month_released!
November, 2019
BIOSAMPLE
ASSAY
335 results
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ChIP-seq
cell line
HepG2
256
EndoC_BH1
1
tissue
layer of hippocampus
19
caudate nucleus
13
substantia nigra
13
cingulate gyrus
12
middle frontal area 46
12
+ See 2 more…
primary cell
astrocyte of the cerebellum
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
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