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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 32pCHi-C
  • 13total RNA-seq
  • 9Hi-C
  • 2ATAC-seq
  • 2ChIP-seq
Assay category
  • 13Transcription
  • 93D chromatin structure
  • 2DNA accessibility
  • 2DNA binding
Target of assay
  • 2histone
  • 2histone modification
  • 2narrow histone mark
Date released
  • 683February, 2021
  • 400November, 2017
  • 382August, 2017
  • 373May, 2021
  • 341May, 2020
  • 313August, 2021
  • 279October, 2019
  • 198June, 2019
  • 153February, 2023
  • 135July, 2018
  • 120May, 2022
  • 115May, 2019
  • 95July, 2019
  • 88November, 2018
  • 80April, 2019
  • 75December, 2017
  • 74October, 2018
  • 58March, 2020
  • 47September, 2023
  • 45November, 2019
  • 40May, 2024
  • 40September, 2020
  • 39February, 2018
  • 35December, 2018
  • 30January, 2019
  • 25February, 2020
  • 23October, 2017
  • 19April, 2020
  • 16April, 2018
  • 16January, 2021
  • 15May, 2023
  • 12September, 2018
  • 10November, 2020
  • 8January, 2018
  • 6September, 2017
  • 5March, 2019
  • 5March, 2023
  • 4December, 2019
  • 2June, 2018
  • 1August, 2018
  • 1August, 2022
  • 1July, 2025
  • 1October, 2022
Available data
  • 42tsv
  • 15bigWig
  • 13bam
  • 11bedpe bed3+
  • 9hic
  • 2bed narrowPeak
  • 2ibed
Organism
  • 58Homo sapiens
Biosample type
  • 40tissue
  • 8in vitro differentiated cells
  • 6cell line
  • 4stem cell
Organ
  • 14pancreas
  • 7heart
  • epithelium
  • 5musculature of body
  • 4blood vessel
  • 4vasculature
  • 3liver
  • 2brain
  • 2connective tissue
  • 2intestine
  • 2kidney
  • 1adipose tissue
  • 1adrenal gland
  • 1esophagus
  • 1gonad
  • 1large intestine
  • 1lung
  • 1mammary gland
  • 1ovary
  • 1small intestine
  • 1spleen
  • 1stomach
  • 1thymus
  • 1urinary bladder
  • 1vein
Project
  • 54AMP
  • 4T1D
Genome assembly (visualization)
  • 26hg19
  • 13GRCh38
Lab
  • 58AMP-T2D consortium
Audit category:
  • 12inconsistent ontology term
organ_slims!
  • epithelium
BIOSAMPLE
ASSAY

58 results

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Clear Filters
pCHi-C
total RNA-seq
Hi-C
ATAC-seq
ChIP-seq
tissue
islet of Langerhans222
psoas muscle122
aorta111
heart left ventricle111
heart right ventricle111
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)211
lymphocyte of B lineage (iPSC)111
embryonic stem cell1
cell line
early embryonic cell2
MCF-71
RCC 7860 VHL1
RCC 7860 vector1
fibroblast cell line1
stem cell
mesenchymal stem cell1
mesendoderm1
neural progenitor cell (neural stem cell)1
trophoblast1
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