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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 26pCHi-C
  • 10total RNA-seq
  • 8Hi-C
  • 2ATAC-seq
  • 2ChIP-seq
Assay category
  • 10Transcription
  • 83D chromatin structure
  • 2DNA accessibility
  • 2DNA binding
Target of assay
  • 2histone
  • 2histone modification
  • 2narrow histone mark
Date released
  • 683February, 2021
  • 388August, 2017
  • 385May, 2021
  • 301August, 2021
  • 285May, 2020
  • 240October, 2019
  • 200May, 2022
  • 199February, 2023
  • 186June, 2019
  • 167July, 2018
  • 111November, 2017
  • 106May, 2019
  • 84July, 2019
  • 79April, 2019
  • 73September, 2018
  • 69October, 2018
  • 59September, 2020
  • 49April, 2018
  • 48March, 2020
  • 47September, 2023
  • 40May, 2024
  • 39February, 2018
  • 38November, 2019
  • 35December, 2017
  • 26November, 2018
  • 25February, 2020
  • 23October, 2017
  • 19April, 2020
  • 15May, 2023
  • 13January, 2021
  • 11September, 2017
  • 10November, 2020
  • 9January, 2019
  • 8January, 2018
  • 7August, 2020
  • 7December, 2018
  • 5March, 2019
  • 5March, 2023
  • 4August, 2018
  • 4October, 2022
  • 3December, 2019
  • 3June, 2018
  • 1August, 2022
Available data
  • 35tsv
  • 12bigWig
  • 10bam
  • 8bedpe bed3+
  • 8hic
  • 2bed narrowPeak
Organism
  • 48Homo sapiens
Biosample type
  • 40tissue
  • 4stem cell
  • 2in vitro differentiated cells
  • 1cell line
  • 1primary cell
Organ
  • 9pancreas
  • 7heart
  • 5musculature of body
  • 4blood vessel
  • 4vasculature
  • 3liver
  • 2brain
  • 2connective tissue
  • 2intestine
  • 1adipose tissue
  • 1adrenal gland
  • 1epithelium
  • 1esophagus
  • 1gonad
  • 1large intestine
  • 1lung
  • 1ovary
  • 1small intestine
  • 1spleen
  • 1stomach
  • 1thymus
  • 1urinary bladder
  • 1vein
Project
  • 44AMP
  • 4T1D
Genome assembly (visualization)
  • 20hg19
  • 10GRCh38
Lab
  • 48AMP-T2D consortium
Audit category:
  • 4inconsistent ontology term
replication_type!
  • isogenic
BIOSAMPLE
ASSAY

48 results

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Clear Filters
pCHi-C
total RNA-seq
Hi-C
ATAC-seq
ChIP-seq
tissue
islet of Langerhans222
psoas muscle122
aorta111
heart left ventricle111
heart right ventricle111
stem cell
mesenchymal stem cell1
mesendoderm1
neural progenitor cell (neural stem cell)1
trophoblast1
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)1
embryonic stem cell1
cell line
early embryonic cell1
primary cell
endothelial cell of umbilical vein1
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