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Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
pCHi-C
5
total RNA-seq
2
ATAC-seq
2
Hi-C
1
ChIP-seq
Assay category
5
Transcription
2
3D chromatin structure
2
DNA accessibility
1
DNA binding
Target of assay
1
histone
1
histone modification
1
narrow histone mark
Date released
295
November, 2017
74
October, 2019
62
November, 2018
59
December, 2017
56
May, 2020
32
February, 2021
32
June, 2019
28
December, 2018
24
July, 2019
23
August, 2017
23
November, 2019
21
January, 2019
18
August, 2021
16
March, 2020
14
May, 2019
14
May, 2021
7
December, 2019
7
October, 2018
6
February, 2023
6
November, 2020
3
January, 2021
1
April, 2019
1
July, 2018
Available data
10
tsv
8
bigWig
6
bam
4
bedpe bed3+
2
hic
2
ibed
1
bed narrowPeak
Organism
16
Homo sapiens
Biosample type
10
cell line
6
in vitro differentiated cells
Organ
5
epithelium
5
pancreas
2
kidney
1
mammary gland
Project
13
AMP
3
T1D
Genome assembly (visualization)
12
hg19
6
GRCh38
Lab
16
AMP-T2D consortium
Audit category:
13
inconsistent ontology term
BIOSAMPLE
ASSAY
16 results
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Clear Filters
pCHi-C
total RNA-seq
ATAC-seq
Hi-C
ChIP-seq
cell line
EndoC_BH1
2
2
1
MCF-7
1
RCC 7860 VHL
1
RCC 7860 vector
1
early embryonic cell
1
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in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
1
1
1
lymphocyte of B lineage (iPSC)
1
1
1
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