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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
70
ChIP-seq
47
single cell RNA-seq
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
1
Hi-C
1
shRNA RNA-seq
1
siRNA RNA-seq
Assay category
70
DNA binding
51
Transcription
1
3D chromatin structure
Target of assay
56
histone
56
histone modification
36
broad histone mark
20
narrow histone mark
12
control
2
RNA binding protein
2
transcription factor
Date released
649
February, 2021
411
August, 2017
400
November, 2017
399
May, 2021
341
May, 2020
313
August, 2021
267
October, 2019
211
June, 2019
200
May, 2022
170
February, 2023
168
July, 2018
96
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
70
May, 2019
61
November, 2019
60
March, 2020
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
23
October, 2017
22
February, 2020
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
70
bam
58
bed narrowPeak
58
bigBed narrowPeak
58
bigWig
1
hic
Organism
118
Homo sapiens
Biosample type
112
tissue
6
primary cell
2
cell line
2
stem cell
Organ
52
kidney
50
blood vessel
vasculature
28
brain
21
heart
7
limb
7
musculature of body
5
artery
5
epithelium
2
pancreas
Project
70
AMP
47
KPMP
4
community
1
ITG
Genome assembly (visualization)
58
GRCh38
58
hg19
Lab
70
AMP-T2D consortium
47
KPMP
4
Anna Gloyn, Oxford
1
ITG
Audit category:
3
inconsistent ontology term
month_released!
April, 2020
organ_slims!
vasculature
BIOSAMPLE
ASSAY
122 results
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Clear Filters
ChIP-seq
single cell RNA-seq
CRISPR RNA-seq
CRISPRi RNA-seq
Hi-C
shRNA RNA-seq
siRNA RNA-seq
tissue
kidney
47
temporal lobe
15
angular gyrus
13
germinal matrix
12
right atrium auricular region
10
+ See 3 more…
primary cell
kidney epithelial cell
5
chondrocytes
1
cell line
EndoC-BH1
1
1
stem cell
SB Ad3.1
1
1
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