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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
473
ChIP-seq
Assay category
473
DNA binding
Target of assay
245
transcription factor
143
histone
143
histone modification
86
broad histone mark
82
control
66
recombinant protein
57
narrow histone mark
38
RNA binding protein
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
649
February, 2021
411
August, 2017
403
November, 2017
399
May, 2021
341
May, 2020
313
August, 2021
October, 2019
213
June, 2019
200
May, 2022
170
February, 2023
168
July, 2018
97
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
70
May, 2019
61
November, 2019
60
March, 2020
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
23
October, 2017
22
February, 2020
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
459
bam
389
bigWig
369
bed narrowPeak
368
bigBed narrowPeak
321
fastq
78
tagAlign
68
bed broadPeak
62
bigBed broadPeak
3
tar
Organism
473
Homo sapiens
Biosample type
315
cell line
147
tissue
11
primary cell
Organ
315
liver
119
brain
56
vasculature
blood vessel
21
heart
11
epithelium
7
limb
7
musculature of body
5
artery
5
kidney
2
pancreas
Project
473
AMP
Genome assembly (visualization)
336
hg19
335
GRCh38
Lab
473
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
Audit category:
10
missing controlled_by
Audit category:
21
inconsistent control read length
4
inconsistent control run_type
month_released!
October, 2019
organ_slims!
blood vessel
BIOSAMPLE
ASSAY
473 results
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Clear Filters
ChIP-seq
cell line
HepG2
315
tissue
layer of hippocampus
22
caudate nucleus
15
substantia nigra
15
temporal lobe
15
cingulate gyrus
14
+ See 8 more…
primary cell
kidney epithelial cell
5
astrocyte of the cerebellum
3
choroid plexus epithelial cell
3
See all biosamples
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