Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
32
total RNA-seq
30
ATAC-seq
25
ChIP-seq
Assay category
32
Transcription
30
DNA accessibility
25
DNA binding
Target of assay
23
histone
23
histone modification
13
narrow histone mark
10
broad histone mark
1
control
1
transcription factor
Date released
80
May, 2022
61
September, 2018
52
February, 2023
35
October, 2019
April, 2018
33
July, 2018
32
February, 2021
29
August, 2017
26
May, 2021
20
June, 2019
19
December, 2017
19
September, 2020
16
November, 2019
13
July, 2019
August, 2020
6
August, 2021
6
December, 2019
6
March, 2020
6
November, 2017
6
November, 2020
5
May, 2019
5
September, 2017
3
August, 2018
3
October, 2022
2
October, 2018
1
June, 2018
Available data
71
bam
70
bigWig
61
fastq
38
bed narrowPeak
32
tsv
14
bigBed narrowPeak
3
tagAlign
Organism
87
Homo sapiens
Biosample type
61
primary cell
21
cell line
5
in vitro differentiated cells
Organ
133
pancreas
87
epithelium
3
heart
2
connective tissue
2
embryo
1
bone element
1
bone marrow
1
thymus
Project
86
AMP
1
T1D
Genome assembly (visualization)
70
GRCh38
70
hg19
Lab
87
AMP-T2D consortium
Audit category:
22
inconsistent ontology term
Audit category:
21
missing controlled_by
month_released!
April, 2018
August, 2020
BIOSAMPLE
ASSAY
87 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
primary cell
pancreatic ductal cell
4
4
13
pancreatic beta cell
10
4
pancreatic acinar cell
2
3
8
pancreatic alpha cell
10
3
cell line
EndoC_BH1
4
16
1
in vitro differentiated cells
pancreatic PP cell
3
endothelial cell
1
intermediate endothelial cell
1
Download