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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 176total RNA-seq
  • 161ChIP-seq
  • 18ATAC-seq
  • 17pCHi-C
  • 1DNAme array
Assay category
  • 176Transcription
  • 161DNA binding
  • 18DNA accessibility
  • 1DNA methylation
Target of assay
  • 138histone
  • 138histone modification
  • 76broad histone mark
  • 62narrow histone mark
  • 15transcription factor
  • 8control
  • 5RNA binding protein
Date released
  • 683February, 2021
  • 400November, 2017
  • 382August, 2017
  • 373May, 2021
  • 341May, 2020
  • 313August, 2021
  • 279October, 2019
  • 198June, 2019
  • 153February, 2023
  • 135July, 2018
  • 120May, 2022
  • 115May, 2019
  • 95July, 2019
  • 88November, 2018
  • 80April, 2019
  • 75December, 2017
  • 74October, 2018
  • 58March, 2020
  • 47September, 2023
  • 45November, 2019
  • 40May, 2024
  • 40September, 2020
  • 39February, 2018
  • 35December, 2018
  • 30January, 2019
  • 25February, 2020
  • 23October, 2017
  • 19April, 2020
  • 16April, 2018
  • 16January, 2021
  • 15May, 2023
  • 12September, 2018
  • 10November, 2020
  • 8January, 2018
  • 6September, 2017
  • 5March, 2019
  • 5March, 2023
  • 4December, 2019
  • 2June, 2018
  • 1August, 2018
  • 1August, 2022
  • 1July, 2025
  • 1October, 2022
Available data
  • 294bigWig
  • 267bam
  • 167tsv
  • 130bed narrowPeak
  • 87tagAlign
  • 2bed bed3+
Organism
  • 373Homo sapiens
Biosample type
  • 206primary cell
  • 127in vitro differentiated cells
  • 40tissue
Organ
  • 61pancreas
  • epithelium
  • 3heart
  • 2connective tissue
  • 2embryo
  • 1bone element
  • 1bone marrow
  • 1thymus
Project
  • 221AMP
  • 152T1D
Genome assembly (visualization)
  • 307hg19
  • 267GRCh38
Lab
  • 235Kyle Gaulton, UCSD
  • 138AMP-T2D consortium
Audit category:
  • 68inconsistent ontology term
organ_slims!
  • epithelium
BIOSAMPLE
ASSAY

373 results

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Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
pCHi-C
DNAme array
primary cell
monocyte52851311
CD8-positive, alpha-beta T cell2331
naive thymus-derived CD4-positive, alpha-beta T cell21
CD4-positive, alpha-beta T cell2
neutrophil11
in vitro differentiated cells
cardiomyocytes593
embryonic stem cell5375
induced pluripotent stem cell9
cardiac fibroblast1
cardiomyocytes (cardiac muscle cell)1
tissue
islet of Langerhans36
cardiac atrium1
cardiac ventricle1
pancreas1
thymus1
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