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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 179total RNA-seq
  • 165ChIP-seq
  • 34ATAC-seq
  • 17pCHi-C
  • 1DNAme array
Assay category
  • 179Transcription
  • 165DNA binding
  • 34DNA accessibility
  • 1DNA methylation
Target of assay
  • 140histone
  • 140histone modification
  • 76broad histone mark
  • 64narrow histone mark
  • 16transcription factor
  • 9control
  • 5RNA binding protein
Date released
  • 649February, 2021
  • 411August, 2017
  • 406November, 2017
  • 396May, 2021
  • 341May, 2020
  • 306October, 2019
  • 227August, 2021
  • 200May, 2022
  • 183June, 2019
  • 169February, 2023
  • 168July, 2018
  • 99May, 2019
  • 94December, 2017
  • 88November, 2018
  • 83July, 2019
  • 76October, 2018
  • 73September, 2018
  • 61November, 2019
  • 59September, 2020
  • 57March, 2020
  • 49April, 2018
  • 47September, 2023
  • 39February, 2018
  • 35December, 2018
  • 30January, 2019
  • 23April, 2019
  • 23October, 2017
  • 22February, 2020
  • 19April, 2020
  • 16January, 2021
  • 16November, 2020
  • 15May, 2023
  • 11September, 2017
  • 10December, 2019
  • 8January, 2018
  • 7August, 2020
  • 5March, 2019
  • 5March, 2023
  • 4August, 2018
  • 4October, 2022
  • 3June, 2018
  • 1August, 2022
  • 1July, 2025
Available data
  • 300bigWig
  • 274bam
  • 170tsv
  • 133bed narrowPeak
  • 90tagAlign
  • 2bed bed3+
Organism
  • 396Homo sapiens
Biosample type
  • 206primary cell
  • 131in vitro differentiated cells
  • 38tissue
  • 21cell line
Organ
  • 61pancreas
  • 26epithelium
  • heart
  • 2connective tissue
  • 2embryo
  • 1bone element
  • 1bone marrow
  • 1thymus
Project
  • 243AMP
  • 153T1D
Genome assembly (visualization)
  • 313hg19
  • 273GRCh38
Lab
  • 235Kyle Gaulton, UCSD
  • 161AMP-T2D consortium
Audit category:
  • 90inconsistent ontology term
organ_slims!
  • heart
BIOSAMPLE
ASSAY

396 results

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Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
pCHi-C
DNAme array
primary cell
monocyte52851311
CD8-positive, alpha-beta T cell2331
naive thymus-derived CD4-positive, alpha-beta T cell21
CD4-positive, alpha-beta T cell2
neutrophil11
in vitro differentiated cells
cardiomyocytes593
embryonic stem cell5375
induced pluripotent stem cell9
pancreatic PP cell3
cardiomyocytes (cardiac muscle cell)1
tissue
islet of Langerhans36
pancreas1
thymus1
cell line
EndoC_BH14116
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