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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 161ChIP-seq
  • 141total RNA-seq
  • 18ATAC-seq
  • 17pCHi-C
  • 1DNAme array
Assay category
  • 161DNA binding
  • 141Transcription
  • 18DNA accessibility
  • 1DNA methylation
Target of assay
  • 138histone
  • 138histone modification
  • 76broad histone mark
  • 62narrow histone mark
  • 15transcription factor
  • 8control
  • 5RNA binding protein
Date released
  • 683February, 2021
  • 406November, 2017
  • 341May, 2020
  • 338May, 2021
  • 315August, 2021
  • 296October, 2019
  • 223August, 2017
  • 214June, 2019
  • 149February, 2023
  • 118May, 2019
  • 102July, 2019
  • 96May, 2022
  • 94December, 2017
  • 81November, 2018
  • 80April, 2019
  • 50March, 2020
  • 47September, 2023
  • 40May, 2024
  • 40September, 2020
  • 39February, 2018
  • 35December, 2018
  • 30January, 2019
  • 24February, 2020
  • 23October, 2018
  • 19April, 2020
  • 18October, 2017
  • 15May, 2023
  • 11July, 2018
  • 10April, 2018
  • 10December, 2019
  • 8January, 2018
  • 8January, 2021
  • 6November, 2019
  • 6November, 2020
  • 5March, 2023
  • 2June, 2018
  • 1August, 2018
  • 1July, 2025
  • 1October, 2022
  • 1September, 2018
Available data
  • 260bigWig
  • 233bam
  • 133tsv
  • 130bed narrowPeak
  • 87tagAlign
  • 2bed bed3+
Organism
  • 338Homo sapiens
Biosample type
  • 206primary cell
  • 129in vitro differentiated cells
  • 3tissue
Organ
  • pancreas
  • 26epithelium
  • 3heart
  • 2connective tissue
  • 2embryo
  • 1bone element
  • 1bone marrow
  • 1thymus
Project
  • 186AMP
  • 152T1D
Genome assembly (visualization)
  • 273hg19
  • 233GRCh38
Lab
  • 234Kyle Gaulton, UCSD
  • 104AMP-T2D consortium
Audit category:
  • 69inconsistent ontology term
organ_slims!
  • pancreas
BIOSAMPLE
ASSAY

338 results

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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
pCHi-C
DNAme array
primary cell
monocyte85521311
CD8-positive, alpha-beta T cell3321
naive thymus-derived CD4-positive, alpha-beta T cell21
CD4-positive, alpha-beta T cell2
neutrophil11
in vitro differentiated cells
cardiomyocytes359
embryonic stem cell3755
induced pluripotent stem cell9
cardiac fibroblast1
cardiomyocytes (cardiac muscle cell)1
tissue
cardiac atrium1
cardiac ventricle1
thymus1
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