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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
ATAC-seq
7
total RNA-seq
4
ChIP-seq
1
pCHi-C
Assay category
16
DNA accessibility
7
Transcription
4
DNA binding
Target of assay
2
histone
2
histone modification
2
narrow histone mark
1
control
1
transcription factor
Date released
487
February, 2021
150
August, 2017
80
May, 2022
66
February, 2023
61
September, 2018
39
October, 2019
35
April, 2018
35
July, 2018
35
June, 2019
31
July, 2019
28
May, 2021
20
October, 2018
19
September, 2020
17
December, 2017
16
November, 2019
12
November, 2020
11
August, 2021
8
March, 2020
7
August, 2020
6
December, 2019
5
September, 2017
4
August, 2018
4
May, 2019
4
November, 2017
3
October, 2022
2
February, 2020
1
January, 2018
1
June, 2018
1
May, 2023
1
November, 2018
1
October, 2017
Available data
11
bam
10
bigWig
7
tsv
3
bed narrowPeak
3
tagAlign
Organism
28
Homo sapiens
Biosample type
21
cell line
6
in vitro differentiated cells
1
primary cell
Organ
61
pancreas
26
epithelium
3
heart
2
connective tissue
2
embryo
1
bone element
1
bone marrow
1
thymus
Project
26
AMP
2
T1D
Genome assembly (visualization)
10
GRCh38
10
hg19
Lab
27
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Audit category:
22
inconsistent ontology term
organ_slims!
mammary gland
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
28 results
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Clear Filters
ATAC-seq
total RNA-seq
ChIP-seq
pCHi-C
cell line
EndoC_BH1
16
4
1
in vitro differentiated cells
pancreatic PP cell
3
cardiac fibroblast
1
endothelial cell
1
intermediate endothelial cell
1
primary cell
adult endothelial progenitor cell
1
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