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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 182total RNA-seq
  • 164ChIP-seq
  • 34ATAC-seq
  • 4pCHi-C
  • 1DNAme array
Assay category
  • 182Transcription
  • 164DNA binding
  • 34DNA accessibility
  • 1DNA methylation
Target of assay
  • 139histone
  • 139histone modification
  • 76broad histone mark
  • 63narrow histone mark
  • 16transcription factor
  • 9control
  • 5RNA binding protein
Date released
  • 683February, 2021
  • 388August, 2017
  • 385May, 2021
  • 301August, 2021
  • 285May, 2020
  • 240October, 2019
  • 200May, 2022
  • 199February, 2023
  • 186June, 2019
  • 167July, 2018
  • 111November, 2017
  • 106May, 2019
  • 84July, 2019
  • 79April, 2019
  • 73September, 2018
  • 69October, 2018
  • 59September, 2020
  • 49April, 2018
  • 48March, 2020
  • 47September, 2023
  • 40May, 2024
  • 39February, 2018
  • 38November, 2019
  • 35December, 2017
  • 26November, 2018
  • 25February, 2020
  • 23October, 2017
  • 19April, 2020
  • 15May, 2023
  • 13January, 2021
  • 11September, 2017
  • 10November, 2020
  • 9January, 2019
  • 8January, 2018
  • 7August, 2020
  • 7December, 2018
  • 5March, 2019
  • 5March, 2023
  • 4August, 2018
  • 4October, 2022
  • 3December, 2019
  • 3June, 2018
  • 1August, 2022
Available data
  • 302bigWig
  • 276bam
  • 173tsv
  • 132bed narrowPeak
  • 90tagAlign
  • 2bed bed3+
Organism
  • 385Homo sapiens
Biosample type
  • 194primary cell
  • 132in vitro differentiated cells
  • 39tissue
  • 20cell line
Organ
  • 60pancreas
  • 25epithelium
  • 3heart
  • 2embryo
  • 1connective tissue
Project
  • 246AMP
  • 139T1D
Genome assembly (visualization)
  • 315hg19
  • 275GRCh38
Lab
  • 222Kyle Gaulton, UCSD
  • 163AMP-T2D consortium
Audit category:
  • 88inconsistent ontology term
replication_type!
  • isogenic
BIOSAMPLE
ASSAY

385 results

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Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
pCHi-C
DNAme array
primary cell
monocyte5285131
CD8-positive, alpha-beta T cell2331
naive thymus-derived CD4-positive, alpha-beta T cell21
alternatively activated macrophage1
embryonic stem cell1
in vitro differentiated cells
cardiomyocytes593
embryonic stem cell5375
induced pluripotent stem cell9
pancreatic PP cell3
cardiac fibroblast1
tissue
islet of Langerhans36
cardiac atrium1
cardiac ventricle1
pancreas1
cell line
EndoC_BH1416
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