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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 64total RNA-seq
  • 61ChIP-seq
  • 4ATAC-seq
  • 4pCHi-C
  • 1DNAme array
Assay category
  • 64Transcription
  • 61DNA binding
  • 4DNA accessibility
  • 1DNA methylation
Target of assay
  • 50histone
  • 50histone modification
  • 29narrow histone mark
  • 21broad histone mark
  • 11transcription factor
  • 5RNA binding protein
Date released
  • 134May, 2021
  • 88May, 2020
  • 50October, 2019
  • 48August, 2021
  • 47February, 2023
  • 44July, 2018
  • 39April, 2018
  • 36July, 2019
  • 33August, 2017
  • 32March, 2020
  • 30June, 2019
  • 25February, 2020
  • 11February, 2021
  • 7October, 2017
  • 5March, 2019
  • 4November, 2020
  • 3August, 2018
  • 3December, 2017
  • 3October, 2022
  • 2January, 2021
  • 2May, 2022
  • 2November, 2018
  • 2September, 2017
  • 1April, 2019
  • 1February, 2018
  • 1June, 2018
  • 1March, 2023
  • 1November, 2019
  • 1October, 2018
  • 1September, 2018
Available data
  • 108bigWig
  • 104bam
  • 58tsv
  • 46bed narrowPeak
  • 46tagAlign
Organism
  • 134Homo sapiens
Biosample type
  • 80primary cell
  • 52in vitro differentiated cells
  • 2tissue
Organ
  • 3heart
  • 2embryo
  • 2epithelium
  • 1connective tissue
Project
  • 73T1D
  • 61AMP
Genome assembly (visualization)
  • 108hg19
  • 104GRCh38
Lab
  • 93Kyle Gaulton, UCSD
  • 41AMP-T2D consortium
Audit category:
  • 18inconsistent ontology term
BIOSAMPLE
ASSAY

134 results

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Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
pCHi-C
DNAme array
primary cell
monocyte24471
naive thymus-derived CD4-positive, alpha-beta T cell21
CD8-positive, alpha-beta T cell1
alternatively activated macrophage1
embryonic stem cell1
in vitro differentiated cells
embryonic stem cell5114
cardiomyocytes12
induced pluripotent stem cell9
cardiac fibroblast1
cardiomyocytes (cardiac muscle cell)1
tissue
cardiac atrium1
cardiac ventricle1
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