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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 182total RNA-seq
  • 89ChIP-seq
  • 34ATAC-seq
  • 17pCHi-C
  • 1DNAme array
Assay category
  • 182Transcription
  • 89DNA binding
  • 34DNA accessibility
  • 1DNA methylation
Target of assay
  • 140histone
  • 140histone modification
  • broad histone mark
  • 64narrow histone mark
  • 16transcription factor
  • 9control
  • 5RNA binding protein
Date released
  • 715February, 2021
  • 356November, 2017
  • 341May, 2020
  • 323May, 2021
  • 310August, 2021
  • 302August, 2017
  • 259October, 2019
  • 210June, 2019
  • 205February, 2023
  • 200May, 2022
  • 168July, 2018
  • 108July, 2019
  • 88November, 2018
  • 79December, 2017
  • 64March, 2020
  • 62May, 2019
  • 59September, 2020
  • 57October, 2018
  • 56September, 2018
  • 55November, 2019
  • 49April, 2018
  • 47September, 2023
  • 43April, 2019
  • 35December, 2018
  • 31February, 2018
  • 26January, 2019
  • 25February, 2020
  • 20May, 2024
  • 19April, 2020
  • 16January, 2021
  • 16November, 2020
  • 15May, 2023
  • 13October, 2017
  • 11September, 2017
  • 10December, 2019
  • 8January, 2018
  • 7August, 2020
  • 5March, 2019
  • 5March, 2023
  • 4August, 2018
  • 4October, 2022
  • 3June, 2018
  • 1August, 2022
Available data
  • 239bigWig
  • 233bam
  • 173tsv
  • 69bed narrowPeak
  • 46tagAlign
  • 2bed bed3+
Organism
  • 323Homo sapiens
Biosample type
  • 140primary cell
  • 122in vitro differentiated cells
  • 40tissue
  • 21cell line
Organ
  • 61pancreas
  • 26epithelium
  • 3heart
  • 2connective tissue
  • 2embryo
  • 1bone element
  • 1bone marrow
  • 1thymus
Project
  • 214AMP
  • 109T1D
Genome assembly (visualization)
  • 252hg19
  • 232GRCh38
Lab
  • 162AMP-T2D consortium
  • 161Kyle Gaulton, UCSD
Audit category:
  • 90inconsistent ontology term
target.investigated_as!
  • broad histone mark
BIOSAMPLE
ASSAY

323 results

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Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
pCHi-C
DNAme array
primary cell
monocyte52411311
CD8-positive, alpha-beta T cell2131
CD4-positive, alpha-beta T cell2
naive thymus-derived CD4-positive, alpha-beta T cell11
B cell1
in vitro differentiated cells
cardiomyocytes593
embryonic stem cell5275
induced pluripotent stem cell9
pancreatic PP cell3
cardiac fibroblast1
tissue
islet of Langerhans36
cardiac atrium1
cardiac ventricle1
pancreas1
thymus1
cell line
EndoC_BH14116
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