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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 182total RNA-seq
  • 34ATAC-seq
  • 25ChIP-seq
  • 17pCHi-C
  • 1DNAme array
Assay category
  • 182Transcription
  • 34DNA accessibility
  • 25DNA binding
  • 1DNA methylation
Target of assay
  • 140histone
  • histone modification
  • 76broad histone mark
  • 64narrow histone mark
  • 16transcription factor
  • 9control
  • 5RNA binding protein
Date released
  • 715February, 2021
  • 318November, 2017
  • 314May, 2020
  • 299August, 2021
  • 259May, 2021
  • 212August, 2017
  • 205February, 2023
  • 200May, 2022
  • 199June, 2019
  • 168July, 2018
  • 118October, 2019
  • 108July, 2019
  • 88November, 2018
  • 63December, 2017
  • 61March, 2020
  • 59September, 2020
  • 51November, 2019
  • 49April, 2018
  • 47September, 2023
  • 46October, 2018
  • 41September, 2018
  • 35December, 2018
  • 28May, 2019
  • 25February, 2020
  • 23February, 2018
  • 23January, 2019
  • 20April, 2019
  • 19April, 2020
  • 16January, 2021
  • 16November, 2020
  • 15May, 2023
  • 11October, 2017
  • 11September, 2017
  • 10December, 2019
  • 8January, 2018
  • 7August, 2020
  • 5March, 2019
  • 5March, 2023
  • 5May, 2024
  • 4August, 2018
  • 4October, 2022
  • 3June, 2018
  • 1August, 2022
Available data
  • 191bam
  • 187bigWig
  • 173tsv
  • 17bed narrowPeak
  • 5tagAlign
  • 2bed bed3+
Organism
  • 259Homo sapiens
Biosample type
  • 111in vitro differentiated cells
  • 88primary cell
  • 40tissue
  • 20cell line
Organ
  • 59pancreas
  • 24epithelium
  • 3heart
  • 2connective tissue
  • 2embryo
  • 1bone element
  • 1bone marrow
  • 1thymus
Project
  • 191AMP
  • 68T1D
Genome assembly (visualization)
  • 200hg19
  • 190GRCh38
Lab
  • 158AMP-T2D consortium
  • 101Kyle Gaulton, UCSD
Audit category:
  • 89inconsistent ontology term
target.investigated_as!
  • histone modification
BIOSAMPLE
ASSAY

259 results

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Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
pCHi-C
DNAme array
in vitro differentiated cells
cardiomyocytes593
embryonic stem cell5517
induced pluripotent stem cell9
pancreatic PP cell2
cardiac fibroblast1
primary cell
monocyte521311
CD8-positive, alpha-beta T cell231
CD4-positive, alpha-beta T cell2
B cell1
activated CD4-positive, alpha-beta T cell1
tissue
islet of Langerhans36
cardiac atrium1
cardiac ventricle1
pancreas1
thymus1
cell line
EndoC_BH1416
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