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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 182total RNA-seq
  • 101ChIP-seq
  • 34ATAC-seq
  • 17pCHi-C
  • 1DNAme array
Assay category
  • 182Transcription
  • 101DNA binding
  • 34DNA accessibility
  • 1DNA methylation
Target of assay
  • 140histone
  • 140histone modification
  • 76broad histone mark
  • narrow histone mark
  • 16transcription factor
  • 9control
  • 5RNA binding protein
Date released
  • 715February, 2021
  • 368November, 2017
  • 335May, 2021
  • 323August, 2017
  • 314May, 2020
  • 308August, 2021
  • 207June, 2019
  • 205February, 2023
  • 200May, 2022
  • 173October, 2019
  • 168July, 2018
  • 108July, 2019
  • 88November, 2018
  • 86May, 2019
  • 78December, 2017
  • 65October, 2018
  • 61March, 2020
  • 59September, 2020
  • 58September, 2018
  • 57April, 2019
  • 57November, 2019
  • 49April, 2018
  • 47September, 2023
  • 35December, 2018
  • 31February, 2018
  • 27January, 2019
  • 25February, 2020
  • 25May, 2024
  • 21October, 2017
  • 19April, 2020
  • 16January, 2021
  • 16November, 2020
  • 15May, 2023
  • 11September, 2017
  • 10December, 2019
  • 8January, 2018
  • 7August, 2020
  • 5March, 2019
  • 5March, 2023
  • 4August, 2018
  • 4October, 2022
  • 3June, 2018
  • 1August, 2022
  • 1July, 2025
Available data
  • 251bigWig
  • 235bam
  • 173tsv
  • 81bed narrowPeak
  • 49tagAlign
  • 2bed bed3+
Organism
  • 335Homo sapiens
Biosample type
  • 154primary cell
  • 121in vitro differentiated cells
  • 40tissue
  • 20cell line
Organ
  • 59pancreas
  • 24epithelium
  • 3heart
  • 2connective tissue
  • 2embryo
  • 1bone element
  • 1bone marrow
  • 1thymus
Project
  • 223AMP
  • 112T1D
Genome assembly (visualization)
  • 264hg19
  • 234GRCh38
Lab
  • 175Kyle Gaulton, UCSD
  • 160AMP-T2D consortium
Audit category:
  • 89inconsistent ontology term
target.investigated_as!
  • narrow histone mark
BIOSAMPLE
ASSAY

335 results

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Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
pCHi-C
DNAme array
primary cell
monocyte52441311
CD8-positive, alpha-beta T cell2231
CD4-positive, alpha-beta T cell2
naive thymus-derived CD4-positive, alpha-beta T cell11
neutrophil11
in vitro differentiated cells
cardiomyocytes593
embryonic stem cell5275
induced pluripotent stem cell9
pancreatic PP cell2
cardiac fibroblast1
tissue
islet of Langerhans36
cardiac atrium1
cardiac ventricle1
pancreas1
thymus1
cell line
EndoC_BH1416
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