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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 182total RNA-seq
  • 165ChIP-seq
  • 34ATAC-seq
  • 17pCHi-C
  • 1DNAme array
Assay category
  • 182Transcription
  • 165DNA binding
  • 34DNA accessibility
  • 1DNA methylation
Target of assay
  • 140histone
  • 140histone modification
  • 76broad histone mark
  • 64narrow histone mark
  • 16transcription factor
  • 9control
  • 5RNA binding protein
Date released
  • 715February, 2021
  • 411August, 2017
  • 406November, 2017
  • 399May, 2021
  • 341May, 2020
  • 319August, 2021
  • 314October, 2019
  • 218June, 2019
  • 205February, 2023
  • 200May, 2022
  • 168July, 2018
  • 120May, 2019
  • 108July, 2019
  • 94December, 2017
  • 88November, 2018
  • 80April, 2019
  • 76October, 2018
  • 73September, 2018
  • 64March, 2020
  • 61November, 2019
  • 59September, 2020
  • 49April, 2018
  • 47September, 2023
  • 40May, 2024
  • 39February, 2018
  • 35December, 2018
  • 30January, 2019
  • 25February, 2020
  • 23October, 2017
  • 19April, 2020
  • 16January, 2021
  • 16November, 2020
  • 15May, 2023
  • 11September, 2017
  • 10December, 2019
  • 8January, 2018
  • 7August, 2020
  • 5March, 2019
  • 5March, 2023
  • 4August, 2018
  • 4October, 2022
  • 3June, 2018
  • 1August, 2022
Available data
  • 303bigWig
  • 277bam
  • 173tsv
  • 133bed narrowPeak
  • 90tagAlign
  • 2bed bed3+
Organism
  • 399Homo sapiens
Biosample type
  • 206primary cell
  • 132in vitro differentiated cells
  • 40tissue
  • 21cell line
Organ
  • 61pancreas
  • 26epithelium
  • 3heart
  • 2connective tissue
  • 2embryo
  • 1bone element
  • 1bone marrow
  • 1thymus
Project
  • 246AMP
  • 153T1D
Genome assembly (visualization)
  • 316hg19
  • 276GRCh38
Lab
  • 235Kyle Gaulton, UCSD
  • 164AMP-T2D consortium
Audit category:
  • 90inconsistent ontology term
BIOSAMPLE
ASSAY

399 results

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Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
pCHi-C
DNAme array
primary cell
monocyte52851311
CD8-positive, alpha-beta T cell2331
naive thymus-derived CD4-positive, alpha-beta T cell21
CD4-positive, alpha-beta T cell2
neutrophil11
in vitro differentiated cells
cardiomyocytes593
embryonic stem cell5375
induced pluripotent stem cell9
pancreatic PP cell3
cardiac fibroblast1
tissue
islet of Langerhans36
cardiac atrium1
cardiac ventricle1
pancreas1
thymus1
cell line
EndoC_BH14116
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