Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 77ATAC-seq
  • 41WGBS
  • 33single cell RNA-seq
  • 26total RNA-seq
  • 21snATAC-seq
Assay category
  • 98DNA accessibility
  • 59Transcription
  • 41DNA methylation
Date released
  • 704February, 2021
  • 406November, 2017
  • 378August, 2017
  • 271August, 2021
  • 265May, 2021
  • 264October, 2019
  • 253May, 2020
  • 198May, 2022
  • 188June, 2019
  • 158February, 2023
  • 124July, 2018
  • 120May, 2019
  • 91December, 2017
  • 86November, 2018
  • 79April, 2019
  • 75October, 2018
  • 72July, 2019
  • 72September, 2018
  • 60November, 2019
  • 59September, 2020
  • 47September, 2023
  • 40May, 2024
  • 38February, 2018
  • 35December, 2018
  • 32March, 2020
  • 30January, 2019
  • 19April, 2020
  • 16October, 2017
  • 15May, 2023
  • 14January, 2021
  • 12November, 2020
  • 10April, 2018
  • 10December, 2019
  • 9September, 2017
  • 8January, 2018
  • 7August, 2020
  • 4March, 2023
  • 2June, 2018
  • 1August, 2018
  • 1August, 2022
  • 1July, 2025
  • 1October, 2022
Available data
  • 134zippedFastqFolder
  • 38bed narrowPeak
  • 24bam
  • 24fastq
  • 20bigWig
  • 6txt
Organism
  • 198Homo sapiens
Biosample type
  • 134primary cell
  • 64tissue
Organ
  • 104pancreas
  • 80epithelium
  • 40liver
Project
  • 134HPAP
  • 64AMP
Genome assembly (visualization)
  • 38hg19
Lab
  • 134Klaus Kaestner, Upenn
  • 40Karen Mohlke, UNC
  • 24Kyle Gaulton, UCSD
replication_type!
  • anisogenic
BIOSAMPLE
ASSAY

198 results

search-icontable-tab-icon
Clear Filters
ATAC-seq
WGBS
single cell RNA-seq
total RNA-seq
snATAC-seq
primary cell
Langerhans cell3321
pancreatic alpha cell2225
pancreatic beta cell1316
pancreatic acinar cell4
tissue
liver2020
islet of Langerhans186
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego