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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
302
ChIP-seq
Assay category
302
DNA binding
Target of assay
244
transcription factor
88
histone
88
histone modification
71
control
recombinant protein
50
broad histone mark
narrow histone mark
37
RNA binding protein
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
715
February, 2021
335
May, 2021
323
August, 2017
314
May, 2020
308
August, 2021
302
November, 2017
207
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
166
October, 2019
108
July, 2019
86
May, 2019
78
December, 2017
72
November, 2018
65
October, 2018
60
March, 2020
59
September, 2020
58
September, 2018
57
April, 2019
November, 2019
49
April, 2018
47
September, 2023
35
December, 2018
31
February, 2018
27
January, 2019
25
February, 2020
25
May, 2024
21
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
297
bam
248
fastq
238
bigWig
218
bed narrowPeak
218
bigBed narrowPeak
57
bed broadPeak
55
bigBed broadPeak
52
tagAlign
3
tar
Organism
302
Homo sapiens
Biosample type
242
cell line
54
tissue
6
primary cell
Organ
242
liver
60
brain
4
epithelium
4
vasculature
2
blood vessel
Project
302
AMP
Genome assembly (visualization)
202
hg19
186
GRCh38
Lab
302
AMP-T2D consortium
Audit category:
9
missing controlled_by
Audit category:
15
inconsistent control read length
4
inconsistent control run_type
month_released!
November, 2019
organ_slims!
stomach
target.investigated_as!
narrow histone mark
recombinant protein
BIOSAMPLE
ASSAY
302 results
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Clear Filters
ChIP-seq
cell line
HepG2
242
tissue
layer of hippocampus
15
caudate nucleus
10
substantia nigra
10
cingulate gyrus
9
middle frontal area 46
9
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primary cell
astrocyte of the cerebellum
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
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