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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
364
ChIP-seq
4
DNase-seq
1
WGBS
Assay category
364
DNA binding
4
DNA accessibility
1
DNA methylation
Target of assay
290
transcription factor
82
recombinant protein
56
control
53
RNA binding protein
20
chromatin remodeller
15
histone
15
histone modification
8
broad histone mark
7
narrow histone mark
2
other context
2
other post-translational modification
Date released
389
February, 2021
315
November, 2017
194
May, 2020
111
August, 2017
63
December, 2017
54
November, 2018
40
May, 2022
36
August, 2021
23
October, 2018
July, 2019
8
October, 2019
5
December, 2019
5
January, 2019
4
March, 2020
3
February, 2020
3
June, 2019
1
August, 2018
1
December, 2018
1
February, 2023
1
January, 2018
1
May, 2023
1
November, 2019
1
October, 2017
Available data
369
fastq
368
bam
321
bigWig
301
bed narrowPeak
301
bigBed narrowPeak
62
bed broadPeak
62
bigBed broadPeak
12
tagAlign
4
bed bed3+
3
tar
1
bed bedMethyl
1
bigBed bedMethyl
Organism
369
Homo sapiens
Biosample type
361
cell line
8
tissue
Organ
368
liver
93
brain
15
blood
15
bodily fluid
9
spleen
7
pancreas
6
epithelium
6
vasculature
3
blood vessel
1
adipose tissue
1
connective tissue
Project
369
AMP
Genome assembly (visualization)
316
hg19
270
GRCh38
Lab
369
AMP-T2D consortium
Audit category:
13
missing controlled_by
Audit category:
26
inconsistent control read length
8
inconsistent control run_type
month_released!
July, 2019
BIOSAMPLE
ASSAY
369 results
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Clear Filters
ChIP-seq
DNase-seq
WGBS
cell line
HepG2
360
1
tissue
liver
4
2
omental fat pad
1
right lobe of liver
1
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