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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
71
ChIP-seq
Assay category
71
DNA binding
Target of assay
196
histone
196
histone modification
141
narrow histone mark
71
transcription factor
55
broad histone mark
control
23
recombinant protein
21
RNA binding protein
7
chromatin remodeller
3
other context
3
other post-translational modification
Date released
244
November, 2017
64
November, 2018
47
August, 2017
42
December, 2017
28
December, 2018
16
May, 2021
15
October, 2018
14
January, 2019
11
August, 2021
7
October, 2019
6
April, 2019
5
February, 2021
5
May, 2019
5
May, 2024
4
June, 2019
1
November, 2019
Available data
71
bam
70
bed narrowPeak
70
bigWig
64
fastq
63
bigBed narrowPeak
Organism
71
Homo sapiens
Biosample type
64
cell line
7
tissue
Organ
49
liver
12
blood
12
bodily fluid
7
kidney
3
spleen
Project
71
AMP
Genome assembly (visualization)
70
GRCh38
68
hg19
Lab
71
AMP-T2D consortium
Audit category:
7
inconsistent ontology term
Audit category:
3
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
month_released!
November, 2020
target.investigated_as!
control
BIOSAMPLE
ASSAY
71 results
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ChIP-seq
cell line
HepG2
45
GM12878
12
RCC 7860 HIF1a re-expression
3
RCC 7860 HIF2a over-expression
2
RCC 7860 vector
2
tissue
liver
4
spleen
3
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