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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 70ChIP-seq
  • 7DNase-seq
  • 3WGBS
  • 1single cell RNA-seq
Assay category
  • 70DNA binding
  • 7DNA accessibility
  • 3DNA methylation
  • 1Transcription
Target of assay
  • 64transcription factor
  • 21RNA binding protein
  • 16recombinant protein
  • 7chromatin remodeller
  • 6control
  • 3other context
  • 3other post-translational modification
Date released
  • 683February, 2021
  • 406November, 2017
  • 341May, 2020
  • 338May, 2021
  • 315August, 2021
  • 296October, 2019
  • 223August, 2017
  • 214June, 2019
  • 149February, 2023
  • 118May, 2019
  • 102July, 2019
  • 96May, 2022
  • 94December, 2017
  • 81November, 2018
  • 80April, 2019
  • 50March, 2020
  • 47September, 2023
  • 40May, 2024
  • 40September, 2020
  • 39February, 2018
  • 35December, 2018
  • 30January, 2019
  • 24February, 2020
  • 23October, 2018
  • 19April, 2020
  • 18October, 2017
  • 15May, 2023
  • 11July, 2018
  • 10April, 2018
  • 10December, 2019
  • 8January, 2018
  • 8January, 2021
  • 6November, 2019
  • 6November, 2020
  • 5March, 2023
  • 2June, 2018
  • 1August, 2018
  • 1July, 2025
  • 1October, 2022
  • 1September, 2018
Available data
  • 81fastq
  • 80bam
  • 73bigWig
  • 70bed narrowPeak
  • 70bigBed narrowPeak
  • 7bed bed3+
  • 7bed broadPeak
  • 7bigBed broadPeak
  • 3bed bedMethyl
  • 3bigBed bedMethyl
  • 1csv
Organism
  • 81Homo sapiens
Biosample type
  • 61cell line
  • 19tissue
  • 1primary cell
Organ
  • 53liver
  • 15blood
  • 15bodily fluid
  • 9spleen
  • pancreas
  • 2brain
  • 1adipose tissue
  • 1connective tissue
Project
  • 81AMP
Genome assembly (visualization)
  • 73GRCh38
  • 68hg19
Lab
  • 81AMP-T2D consortium
Audit category:
  • 3missing controlled_by
Audit category:
  • 5inconsistent control read length
  • 4inconsistent control run_type
organ_slims!
  • pancreas
BIOSAMPLE
ASSAY

81 results

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Clear Filters
ChIP-seq
DNase-seq
WGBS
single cell RNA-seq
cell line
HepG2451
GM1287815
tissue
spleen612
liver42
brain2
omental fat pad1
right lobe of liver1
primary cell
pancreatic cell1
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