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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 9ChIP-seq
  • 9DNase-seq
  • 6WGBS
  • 1FAIRE-seq
  • 1single cell RNA-seq
Assay category
  • 10DNA accessibility
  • 9DNA binding
  • 6DNA methylation
  • 1Transcription
Target of assay
  • 6transcription factor
  • 3control
  • 3other context
  • 3other post-translational modification
  • 2chromatin remodeller
  • 1RNA binding protein
  • 1recombinant protein
Date released
  • 683February, 2021
  • 388August, 2017
  • 385May, 2021
  • 301August, 2021
  • 285May, 2020
  • 240October, 2019
  • 200May, 2022
  • 199February, 2023
  • 186June, 2019
  • 167July, 2018
  • 111November, 2017
  • 106May, 2019
  • 84July, 2019
  • 79April, 2019
  • 73September, 2018
  • 69October, 2018
  • 59September, 2020
  • 49April, 2018
  • 48March, 2020
  • 47September, 2023
  • 40May, 2024
  • 39February, 2018
  • 38November, 2019
  • 35December, 2017
  • 26November, 2018
  • 25February, 2020
  • 23October, 2017
  • 19April, 2020
  • 15May, 2023
  • 13January, 2021
  • 11September, 2017
  • 10November, 2020
  • 9January, 2019
  • 8January, 2018
  • 7August, 2020
  • 7December, 2018
  • 5March, 2019
  • 5March, 2023
  • 4August, 2018
  • 4October, 2022
  • 3December, 2019
  • 3June, 2018
  • 1August, 2022
Available data
  • 26fastq
  • 25bam
  • 21bigWig
  • 15bed narrowPeak
  • 15bigBed narrowPeak
  • 9bed bed3+
  • 9bed broadPeak
  • 9bigBed broadPeak
  • 6bed bedMethyl
  • 6bigBed bedMethyl
  • 1csv
Organism
  • 26Homo sapiens
Biosample type
  • 22tissue
  • 3cell line
  • 1primary cell
Organ
  • 9spleen
  • 7pancreas
  • 4liver
  • 2blood
  • 2bodily fluid
  • 2brain
  • 1adipose tissue
  • 1connective tissue
Project
  • 26AMP
Genome assembly (visualization)
  • 20GRCh38
  • 15hg19
Lab
  • 26AMP-T2D consortium
Audit category:
  • 1missing controlled_by
replication_type!
  • isogenic
BIOSAMPLE
ASSAY

26 results

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Clear Filters
ChIP-seq
DNase-seq
WGBS
FAIRE-seq
single cell RNA-seq
tissue
spleen612
body of pancreas22
pancreas21
brain2
liver2
cell line
GM128782
HepG21
primary cell
pancreatic cell1
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