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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 9ChIP-seq
  • 8DNase-seq
  • 6WGBS
  • 1single cell RNA-seq
Assay category
  • 9DNA binding
  • 8DNA accessibility
  • 6DNA methylation
  • 1Transcription
Target of assay
  • 6transcription factor
  • 3control
  • 3other context
  • 3other post-translational modification
  • 2chromatin remodeller
  • 1RNA binding protein
  • 1recombinant protein
Date released
  • 672February, 2021
  • 355August, 2017
  • 253August, 2021
  • 251May, 2021
  • 198May, 2022
  • 197May, 2020
  • 190October, 2019
  • 156June, 2019
  • 152February, 2023
  • 123July, 2018
  • 111November, 2017
  • 106May, 2019
  • 78April, 2019
  • 72September, 2018
  • 68October, 2018
  • 59September, 2020
  • 48July, 2019
  • 47September, 2023
  • 40May, 2024
  • 38February, 2018
  • 37November, 2019
  • 32December, 2017
  • 24November, 2018
  • 19April, 2020
  • 16March, 2020
  • 16October, 2017
  • 15May, 2023
  • 11January, 2021
  • 10April, 2018
  • 9January, 2019
  • 9September, 2017
  • 8January, 2018
  • 7August, 2020
  • 7December, 2018
  • 6November, 2020
  • 4March, 2023
  • 3December, 2019
  • 2June, 2018
  • 1August, 2018
  • 1August, 2022
  • 1October, 2022
Available data
  • 24fastq
  • 23bam
  • 19bigWig
  • 13bed narrowPeak
  • 13bigBed narrowPeak
  • 8bed bed3+
  • 8bed broadPeak
  • 8bigBed broadPeak
  • 6bed bedMethyl
  • 6bigBed bedMethyl
  • 1csv
Organism
  • 24Homo sapiens
Biosample type
  • 20tissue
  • 3cell line
  • 1primary cell
Organ
  • 9spleen
  • 6pancreas
  • 3liver
  • 2blood
  • 2bodily fluid
  • 2brain
  • 1adipose tissue
  • 1connective tissue
Project
  • 24AMP
Genome assembly (visualization)
  • 19GRCh38
  • 13hg19
Lab
  • 24AMP-T2D consortium
Audit category:
  • 1missing controlled_by
BIOSAMPLE
ASSAY

24 results

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Clear Filters
ChIP-seq
DNase-seq
WGBS
single cell RNA-seq
tissue
spleen612
body of pancreas22
brain2
pancreas2
liver1
cell line
GM128782
HepG21
primary cell
pancreatic cell1
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