Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 64ChIP-seq
  • 9DNase-seq
  • 7WGBS
  • 1FAIRE-seq
  • 1single cell RNA-seq
Assay category
  • 64DNA binding
  • 10DNA accessibility
  • 7DNA methylation
  • 1Transcription
Target of assay
  • 64transcription factor
  • 21RNA binding protein
  • 16recombinant protein
  • 7chromatin remodeller
  • control
  • 3other context
  • 3other post-translational modification
Date released
  • 712February, 2021
  • 390May, 2021
  • 361August, 2017
  • 335November, 2017
  • 318May, 2020
  • 307August, 2021
  • 275October, 2019
  • 210June, 2019
  • 205February, 2023
  • 200May, 2022
  • 168July, 2018
  • 105July, 2019
  • 97May, 2019
  • 82November, 2018
  • 73December, 2017
  • 73September, 2018
  • 66April, 2019
  • 64March, 2020
  • 59November, 2019
  • 59September, 2020
  • 49April, 2018
  • 47October, 2018
  • 47September, 2023
  • 40May, 2024
  • 31December, 2018
  • 31February, 2018
  • 26January, 2019
  • 25February, 2020
  • 20October, 2017
  • 19April, 2020
  • 16January, 2021
  • 15May, 2023
  • 11November, 2020
  • 10December, 2019
  • 8January, 2018
  • 7August, 2020
  • 5March, 2019
  • 5March, 2023
  • 5September, 2017
  • 4August, 2018
  • 4October, 2022
  • 3June, 2018
  • 1August, 2022
Available data
  • 82fastq
  • 81bam
  • 80bigWig
  • 73bed narrowPeak
  • 73bigBed narrowPeak
  • 9bed bed3+
  • 9bed broadPeak
  • 9bigBed broadPeak
  • 7bed bedMethyl
  • 7bigBed bedMethyl
  • 1csv
Organism
  • 82Homo sapiens
Biosample type
  • 58cell line
  • 23tissue
  • 1primary cell
Organ
  • 53liver
  • 12blood
  • 12bodily fluid
  • 7pancreas
  • 6spleen
  • 2brain
  • 1adipose tissue
  • 1connective tissue
Project
  • 82AMP
Genome assembly (visualization)
  • 79GRCh38
  • 71hg19
Lab
  • 82AMP-T2D consortium
Audit category:
  • 3missing controlled_by
Audit category:
  • 5inconsistent control read length
  • 4inconsistent control run_type
target.investigated_as!
  • control
BIOSAMPLE
ASSAY

82 results

search-icontable-tab-icon
Clear Filters
ChIP-seq
DNase-seq
WGBS
FAIRE-seq
single cell RNA-seq
cell line
HepG2451
GM1287812
tissue
liver42
spleen312
body of pancreas22
pancreas21
brain2
primary cell
pancreatic cell1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego