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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
26
ATAC-seq
20
total RNA-seq
6
ChIP-seq
2
Hi-C
Assay category
26
DNA accessibility
20
Transcription
6
DNA binding
2
3D chromatin structure
Target of assay
10
histone
10
histone modification
broad histone mark
4
narrow histone mark
2
control
RNA binding protein
1
transcription factor
Date released
715
February, 2021
341
May, 2020
319
November, 2017
318
May, 2021
309
August, 2021
294
August, 2017
259
October, 2019
206
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
108
July, 2019
75
December, 2017
67
November, 2018
64
March, 2020
59
September, 2020
57
May, 2019
56
September, 2018
54
November, 2019
49
April, 2018
47
September, 2023
October, 2018
39
April, 2019
33
December, 2018
31
February, 2018
25
February, 2020
20
January, 2019
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
15
May, 2024
13
October, 2017
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
52
bam
30
bed narrowPeak
24
bigWig
20
tsv
2
bedpe bed3+
2
hic
Organism
54
Homo sapiens
Biosample type
40
tissue
9
cell line
5
in vitro differentiated cells
Organ
48
pancreas
9
epithelium
1
adipose tissue
1
connective tissue
Project
54
AMP
Genome assembly (visualization)
52
hg19
50
GRCh38
Lab
54
AMP-T2D consortium
Audit category:
15
inconsistent ontology term
month_released!
October, 2018
target.investigated_as!
RNA binding protein
broad histone mark
BIOSAMPLE
ASSAY
54 results
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Clear Filters
ATAC-seq
total RNA-seq
ChIP-seq
Hi-C
tissue
islet of Langerhans
19
19
1
adipose tissue(adipose white tissue)
1
cell line
EndoC_BH1
1
1
6
1
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
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