Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 25ATAC-seq
  • 19total RNA-seq
  • 1Hi-C
Assay category
  • 25DNA accessibility
  • 19Transcription
  • 13D chromatin structure
Date released
  • 683February, 2021
  • 400November, 2017
  • 382August, 2017
  • 373May, 2021
  • 341May, 2020
  • 313August, 2021
  • 279October, 2019
  • 198June, 2019
  • 153February, 2023
  • 135July, 2018
  • 120May, 2022
  • 115May, 2019
  • 95July, 2019
  • 88November, 2018
  • 80April, 2019
  • 75December, 2017
  • 74October, 2018
  • 58March, 2020
  • 47September, 2023
  • 45November, 2019
  • 40May, 2024
  • 40September, 2020
  • 39February, 2018
  • 35December, 2018
  • 30January, 2019
  • 25February, 2020
  • 23October, 2017
  • 19April, 2020
  • 16April, 2018
  • 16January, 2021
  • 15May, 2023
  • 12September, 2018
  • 10November, 2020
  • 8January, 2018
  • 6September, 2017
  • 5March, 2019
  • 5March, 2023
  • 4December, 2019
  • 2June, 2018
  • 1August, 2018
  • 1August, 2022
  • 1July, 2025
  • 1October, 2022
Available data
  • 44bam
  • 25bed narrowPeak
  • 19bigWig
  • 19tsv
  • 1bedpe bed3+
  • 1hic
Organism
  • 45Homo sapiens
Biosample type
  • 40tissue
  • 5in vitro differentiated cells
Organ
  • 55pancreas
  • epithelium
  • 1adipose tissue
  • 1connective tissue
Project
  • 45AMP
Genome assembly (visualization)
  • 45hg19
  • 44GRCh38
Lab
  • 45AMP-T2D consortium
Audit category:
  • 6inconsistent ontology term
organ_slims!
  • epithelium
BIOSAMPLE
ASSAY

45 results

search-icontable-tab-icon
Clear Filters
ATAC-seq
total RNA-seq
Hi-C
tissue
islet of Langerhans19191
adipose tissue(adipose white tissue)1
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)5
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego