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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 26ATAC-seq
  • 20total RNA-seq
  • 7ChIP-seq
  • 2Hi-C
Assay category
  • 26DNA accessibility
  • 20Transcription
  • 7DNA binding
  • 23D chromatin structure
Target of assay
  • 10histone
  • 10histone modification
  • broad histone mark
  • 4narrow histone mark
  • 2control
  • 1RNA binding protein
  • 1transcription factor
Date released
  • 715February, 2021
  • 356November, 2017
  • 341May, 2020
  • 323May, 2021
  • 310August, 2021
  • 302August, 2017
  • 259October, 2019
  • 210June, 2019
  • 205February, 2023
  • 200May, 2022
  • 168July, 2018
  • 108July, 2019
  • 88November, 2018
  • 79December, 2017
  • 64March, 2020
  • 62May, 2019
  • 59September, 2020
  • 57October, 2018
  • 56September, 2018
  • 55November, 2019
  • 49April, 2018
  • 47September, 2023
  • 43April, 2019
  • 35December, 2018
  • 31February, 2018
  • 26January, 2019
  • 25February, 2020
  • 20May, 2024
  • 19April, 2020
  • 16January, 2021
  • 16November, 2020
  • 15May, 2023
  • 13October, 2017
  • 11September, 2017
  • 10December, 2019
  • 8January, 2018
  • 7August, 2020
  • 5March, 2019
  • 5March, 2023
  • 4August, 2018
  • 4October, 2022
  • 3June, 2018
  • 1August, 2022
Available data
  • 53bam
  • 31bed narrowPeak
  • 25bigWig
  • 20tsv
  • 2bedpe bed3+
  • 2hic
Organism
  • 55Homo sapiens
Biosample type
  • 40tissue
  • 10cell line
  • 5in vitro differentiated cells
Organ
  • 49pancreas
  • 10epithelium
  • 1adipose tissue
  • 1connective tissue
Project
  • 55AMP
Genome assembly (visualization)
  • 53hg19
  • 51GRCh38
Lab
  • 55AMP-T2D consortium
Audit category:
  • 16inconsistent ontology term
target.investigated_as!
  • broad histone mark
BIOSAMPLE
ASSAY

55 results

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Clear Filters
ATAC-seq
total RNA-seq
ChIP-seq
Hi-C
tissue
islet of Langerhans19191
adipose tissue(adipose white tissue)1
cell line
EndoC_BH11171
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)5
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