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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
47
ChIP-seq
26
total RNA-seq
22
ATAC-seq
1
single cell RNA-seq
Assay category
47
DNA binding
27
Transcription
22
DNA accessibility
Target of assay
44
histone
44
histone modification
27
broad histone mark
17
narrow histone mark
3
control
Date released
715
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
63
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
90
fastq
87
bam
86
bigWig
58
bed narrowPeak
26
tsv
20
bigBed narrowPeak
14
tagAlign
4
bed broadPeak
1
csv
Organism
96
Homo sapiens
Biosample type
73
primary cell
23
tissue
Organ
77
pancreas
61
epithelium
16
brain
1
adipose tissue
1
connective tissue
1
spleen
Project
96
AMP
Genome assembly (visualization)
86
GRCh38
85
hg19
Lab
95
AMP-T2D consortium
1
Stephen Parker, UMich
Audit category:
36
missing controlled_by
organ_slims!
urinary bladder
BIOSAMPLE
ASSAY
96 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
single cell RNA-seq
primary cell
pancreatic ductal cell
13
4
4
pancreatic beta cell
10
4
pancreatic acinar cell
8
2
3
pancreatic alpha cell
10
3
pancreatic endocrine cell
11
+ See 1 more…
tissue
brain
15
body of pancreas
4
cerebellum (Hemisphere)
1
islet of Langerhans
1
omental fat pad
1
+ See 1 more…
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