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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
70
ChIP-seq
28
total RNA-seq
14
ATAC-seq
1
single cell RNA-seq
Assay category
70
DNA binding
29
Transcription
14
DNA accessibility
Target of assay
62
histone
62
histone modification
broad histone mark
29
control
26
narrow histone mark
15
transcription factor
11
RNA binding protein
Date released
715
February, 2021
356
November, 2017
341
May, 2020
323
May, 2021
310
August, 2021
302
August, 2017
259
October, 2019
210
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
108
July, 2019
88
November, 2018
79
December, 2017
64
March, 2020
62
May, 2019
59
September, 2020
57
October, 2018
56
September, 2018
55
November, 2019
49
April, 2018
47
September, 2023
43
April, 2019
December, 2018
31
February, 2018
26
January, 2019
25
February, 2020
20
May, 2024
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
13
October, 2017
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
112
bam
105
fastq
83
bigWig
55
bed narrowPeak
40
bigBed narrowPeak
28
tsv
1
csv
Organism
113
Homo sapiens
Biosample type
58
primary cell
55
tissue
Organ
89
pancreas
53
epithelium
23
adipose tissue
23
connective tissue
Project
113
AMP
Genome assembly (visualization)
83
GRCh38
83
hg19
Lab
113
AMP-T2D consortium
Audit category:
15
missing controlled_by
Audit category:
1
inconsistent control read length
month_released!
April, 2020
December, 2018
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
113 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
single cell RNA-seq
primary cell
pancreatic ductal cell
7
4
4
pancreatic beta cell
10
4
pancreatic alpha cell
10
3
pancreatic acinar cell
4
4
3
pancreatic endocrine cell
4
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tissue
body of pancreas
22
subcutaneous adipose tissue
12
omental fat pad
11
endocrine pancreas
8
pancreas
2
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