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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
63
ChIP-seq
33
total RNA-seq
16
ATAC-seq
5
DNase-seq
Assay category
63
DNA binding
33
Transcription
21
DNA accessibility
Target of assay
51
histone
51
histone modification
29
broad histone mark
22
narrow histone mark
12
control
Date released
80
May, 2022
61
September, 2018
56
October, 2019
52
February, 2023
33
April, 2018
33
July, 2018
32
February, 2021
29
August, 2017
26
May, 2021
20
June, 2019
19
December, 2017
19
September, 2020
16
November, 2019
13
July, 2019
7
August, 2020
6
August, 2021
6
December, 2019
6
November, 2017
6
November, 2020
5
March, 2020
5
May, 2019
5
September, 2017
3
August, 2018
3
October, 2022
2
October, 2018
1
February, 2020
1
June, 2018
Available data
115
bam
102
bigWig
70
bed narrowPeak
61
fastq
41
bigBed narrowPeak
33
tsv
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
Organism
117
Homo sapiens
Biosample type
73
primary cell
42
tissue
2
cell line
Organ
96
epithelium
90
pancreas
86
brain
69
limb
47
blood vessel
47
vasculature
42
nerve
30
kidney
26
artery
21
eye
vein
8
heart
7
liver
4
connective tissue
4
gonad
4
ovary
2
pituitary gland
1
adipose tissue
1
lymph node
1
skin of body
Project
117
AMP
Genome assembly (visualization)
103
GRCh38
103
hg19
Lab
117
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
Audit category:
21
missing controlled_by
organ_slims!
vein
BIOSAMPLE
ASSAY
117 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
DNase-seq
primary cell
pancreatic ductal cell
13
4
4
pancreatic beta cell
10
4
pancreatic acinar cell
8
2
3
pancreatic alpha cell
10
3
epithelial cell of proximal tubule
7
+ See 3 more…
tissue
tibial nerve
35
4
1
2
cell line
glomerular visceral epithelial cell
1
1
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