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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 202ChIP-seq
  • 30total RNA-seq
  • 21ATAC-seq
  • 6DNase-seq
  • 4Hi-C
  • 4pCHi-C
Assay category
  • 202DNA binding
  • 30Transcription
  • 27DNA accessibility
  • 43D chromatin structure
Target of assay
  • 163histone
  • 163histone modification
  • 131narrow histone mark
  • 32broad histone mark
  • 32control
  • 7recombinant protein
  • 7transcription factor
Date released
  • 649February, 2021
  • 411August, 2017
  • 403November, 2017
  • 399May, 2021
  • 341May, 2020
  • 313August, 2021
  • 267October, 2019
  • 213June, 2019
  • 200May, 2022
  • 170February, 2023
  • 168July, 2018
  • 97July, 2019
  • 94December, 2017
  • 88November, 2018
  • 80April, 2019
  • 76October, 2018
  • 73September, 2018
  • 70May, 2019
  • 61November, 2019
  • 60March, 2020
  • 59September, 2020
  • 49April, 2018
  • 47September, 2023
  • 40May, 2024
  • 39February, 2018
  • 35December, 2018
  • 30January, 2019
  • 23October, 2017
  • 22February, 2020
  • 19April, 2020
  • 16January, 2021
  • 16November, 2020
  • 15May, 2023
  • 11September, 2017
  • 10December, 2019
  • 8January, 2018
  • 7August, 2020
  • 5March, 2019
  • 5March, 2023
  • 4August, 2018
  • 4October, 2022
  • 3June, 2018
  • 1August, 2022
  • 1July, 2025
Available data
  • 204bam
  • 171bigWig
  • 155bed narrowPeak
  • 49tagAlign
  • 37bigBed narrowPeak
  • 16tsv
  • 4bed bed3+
  • 3bed broadPeak
  • 3bedpe bed3+
  • 3bigBed broadPeak
  • 3hic
  • 1hdf5
  • 1tagAlign bed3+
Organism
  • 267Homo sapiens
Biosample type
  • 216tissue
  • 30cell line
  • 13primary cell
  • 8in vitro differentiated cells
Organ
  • 86brain
  • 69limb
  • blood vessel
  • 47vasculature
  • 42nerve
  • 35epithelium
  • 30kidney
  • 26artery
  • 21eye
  • 21vein
  • 18pancreas
  • 8heart
  • 7liver
  • 4connective tissue
  • 4gonad
  • 4ovary
  • 2pituitary gland
  • 1adipose tissue
  • 1lymph node
  • 1skin of body
Project
  • 267AMP
Genome assembly (visualization)
  • 180hg19
  • 174GRCh38
Lab
  • 267AMP-T2D consortium
Audit category:
  • 23inconsistent ontology term
Audit category:
  • 1inconsistent assembly
organ_slims!
  • blood vessel
BIOSAMPLE
ASSAY

267 results

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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
DNase-seq
Hi-C
pCHi-C
tissue
islet of Langerhans2114134
tibial nerve35412
heart521
brain51
liver51
cell line
Panc11311
RCC 7860 HIF1a re-expression41
RCC 7860 HIF2a over-expression31
RCC 7860 vector31
glomerular visceral epithelial cell11
primary cell
epithelial cell of proximal tubule7
kidney glomerular epithelial cell11
kidney tubule cell11
Heart fetal (cardiac muscle cell)1
Liver fetal (hepatocyte)1
in vitro differentiated cells
cardiac precursors (cardiac muscle cell)111
cardiomyocytes (cardiac muscle cell)111
adipocyte2
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