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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 221ChIP-seq
  • 24total RNA-seq
  • 22ATAC-seq
  • 7DNase-seq
  • 5Hi-C
  • 4pCHi-C
  • 1FAIRE-seq
Assay category
  • 221DNA binding
  • 30DNA accessibility
  • 24Transcription
  • 53D chromatin structure
Target of assay
  • 188histone
  • 188histone modification
  • 136narrow histone mark
  • 52broad histone mark
  • 33control
Date released
  • 707February, 2021
  • 411August, 2017
  • 406November, 2017
  • 399May, 2021
  • 341May, 2020
  • 284October, 2019
  • 205February, 2023
  • 200May, 2022
  • 189August, 2021
  • 168July, 2018
  • 137June, 2019
  • 115May, 2019
  • 97July, 2019
  • 94December, 2017
  • 88November, 2018
  • 76October, 2018
  • 73September, 2018
  • 62March, 2020
  • 61November, 2019
  • 59September, 2020
  • 57April, 2019
  • 49April, 2018
  • 40May, 2024
  • 39February, 2018
  • 35December, 2018
  • 30January, 2019
  • 25February, 2020
  • 23October, 2017
  • 19April, 2020
  • 16January, 2021
  • 16November, 2020
  • 11September, 2017
  • 8January, 2018
  • 7August, 2020
  • 7December, 2019
  • 5March, 2019
  • 5March, 2023
  • 4August, 2018
  • 4October, 2022
  • 3June, 2018
  • 1August, 2022
  • 1July, 2025
  • 1May, 2023
Available data
  • 222bam
  • 185bigWig
  • 173bed narrowPeak
  • 69bigBed narrowPeak
  • 49tagAlign
  • 10tsv
  • 9bed broadPeak
  • 9bigBed broadPeak
  • 8bed bed3+
  • 4hic
  • 3bedpe bed3+
  • 1hdf5
  • 1tagAlign bed3+
  • 1tar
Organism
  • 284Homo sapiens
Biosample type
  • 238tissue
  • 23primary cell
  • 15cell line
  • 8in vitro differentiated cells
Organ
  • 86brain
  • 69limb
  • 47blood vessel
  • 47vasculature
  • 42nerve
  • 35epithelium
  • kidney
  • 26artery
  • 21eye
  • 21vein
  • 18pancreas
  • 8heart
  • 7liver
  • 4connective tissue
  • 4gonad
  • 4ovary
  • 2pituitary gland
  • 1adipose tissue
  • 1lymph node
  • 1skin of body
Project
  • 284AMP
Genome assembly (visualization)
  • 195hg19
  • 185GRCh38
Lab
  • 284AMP-T2D consortium
Audit category:
  • 10inconsistent ontology term
  • 1audit script error
Audit category:
  • 1inconsistent assembly
organ_slims!
  • kidney
BIOSAMPLE
ASSAY

284 results

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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
DNase-seq
Hi-C
pCHi-C
FAIRE-seq
tissue
islet of Langerhans2114134
tibial nerve35412
tibial artery2312
heart521
brain51
primary cell
endothelial cell of umbilical vein17211
Heart fetal (cardiac muscle cell)1
Liver fetal (hepatocyte)1
cell line
Panc11311
in vitro differentiated cells
cardiac precursors (cardiac muscle cell)111
cardiomyocytes (cardiac muscle cell)111
adipocyte2
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