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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 225ChIP-seq
  • 30total RNA-seq
  • 22ATAC-seq
  • 8DNase-seq
  • 4Hi-C
  • 4pCHi-C
Assay category
  • 225DNA binding
  • 30DNA accessibility
  • 30Transcription
  • 43D chromatin structure
Target of assay
  • 181histone
  • 181histone modification
  • 135narrow histone mark
  • 46broad histone mark
  • 37control
  • 7recombinant protein
  • 7transcription factor
Date released
  • 715February, 2021
  • 411August, 2017
  • 406November, 2017
  • 399May, 2021
  • 341May, 2020
  • 319August, 2021
  • 293October, 2019
  • 218June, 2019
  • 205February, 2023
  • 200May, 2022
  • 168July, 2018
  • 120May, 2019
  • 108July, 2019
  • 94December, 2017
  • 88November, 2018
  • 80April, 2019
  • 76October, 2018
  • 73September, 2018
  • 63March, 2020
  • 61November, 2019
  • 59September, 2020
  • 49April, 2018
  • 47September, 2023
  • 40May, 2024
  • 39February, 2018
  • 35December, 2018
  • 30January, 2019
  • 25February, 2020
  • 23October, 2017
  • 19April, 2020
  • 16January, 2021
  • 16November, 2020
  • 15May, 2023
  • 11September, 2017
  • 10December, 2019
  • 8January, 2018
  • 7August, 2020
  • 5March, 2019
  • 5March, 2023
  • 4August, 2018
  • 4October, 2022
  • 3June, 2018
  • 1August, 2022
  • 1July, 2025
Available data
  • 230bam
  • 192bigWig
  • 176bed narrowPeak
  • 57bigBed narrowPeak
  • 49tagAlign
  • 16tsv
  • 6bed bed3+
  • 5bed broadPeak
  • 5bigBed broadPeak
  • 3bedpe bed3+
  • 3hic
  • 1hdf5
  • 1tagAlign bed3+
Organism
  • 293Homo sapiens
Biosample type
  • 242tissue
  • 30cell line
  • 13primary cell
  • 8in vitro differentiated cells
Organ
  • 86brain
  • 69limb
  • 47blood vessel
  • 47vasculature
  • 42nerve
  • 35epithelium
  • 30kidney
  • 26artery
  • 21eye
  • vein
  • 18pancreas
  • 8heart
  • 7liver
  • 4connective tissue
  • 4gonad
  • 4ovary
  • 2pituitary gland
  • 1adipose tissue
  • 1lymph node
  • 1skin of body
Project
  • 293AMP
Genome assembly (visualization)
  • 201hg19
  • 195GRCh38
Lab
  • 293AMP-T2D consortium
Audit category:
  • 23inconsistent ontology term
Audit category:
  • 1inconsistent assembly
organ_slims!
  • vein
BIOSAMPLE
ASSAY

293 results

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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
DNase-seq
Hi-C
pCHi-C
tissue
islet of Langerhans2114134
tibial nerve35412
tibial artery2312
heart521
brain51
cell line
Panc11311
RCC 7860 HIF1a re-expression41
RCC 7860 HIF2a over-expression31
RCC 7860 vector31
glomerular visceral epithelial cell11
primary cell
epithelial cell of proximal tubule7
kidney glomerular epithelial cell11
kidney tubule cell11
Heart fetal (cardiac muscle cell)1
Liver fetal (hepatocyte)1
in vitro differentiated cells
cardiac precursors (cardiac muscle cell)111
cardiomyocytes (cardiac muscle cell)111
adipocyte2
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