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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
76
ChIP-seq
6
DNase-seq
5
ATAC-seq
4
total RNA-seq
1
FAIRE-seq
1
Hi-C
Assay category
76
DNA binding
12
DNA accessibility
4
Transcription
1
3D chromatin structure
Target of assay
58
histone
58
histone modification
39
broad histone mark
19
narrow histone mark
18
control
Date released
521
February, 2021
125
August, 2017
93
October, 2019
50
May, 2019
49
February, 2023
30
July, 2019
25
June, 2019
23
October, 2018
11
August, 2021
7
March, 2020
6
February, 2020
6
November, 2017
6
November, 2020
3
May, 2021
2
April, 2018
2
July, 2018
1
August, 2018
1
January, 2018
1
May, 2023
1
November, 2018
1
November, 2019
1
October, 2017
Available data
88
bam
70
bigWig
62
bigBed narrowPeak
61
bed narrowPeak
8
bed broadPeak
8
bigBed broadPeak
6
bed bed3+
4
tsv
1
hic
1
tar
Organism
93
Homo sapiens
Biosample type
70
tissue
21
primary cell
2
in vitro differentiated cells
Organ
86
brain
69
limb
47
blood vessel
47
vasculature
42
nerve
35
epithelium
30
kidney
26
artery
21
eye
21
vein
18
pancreas
8
heart
7
liver
4
connective tissue
4
gonad
4
ovary
2
pituitary gland
1
adipose tissue
1
lymph node
1
skin of body
0
thymus
Project
93
AMP
Genome assembly (visualization)
71
hg19
64
GRCh38
Lab
93
AMP-T2D consortium
Audit category:
1
audit script error
BIOSAMPLE
ASSAY
93 results
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Clear Filters
ChIP-seq
DNase-seq
ATAC-seq
total RNA-seq
FAIRE-seq
Hi-C
tissue
tibial nerve
35
2
1
4
tibial artery
23
2
1
adipose tissue
1
islet of Langerhans
1
primary cell
endothelial cell of umbilical vein
17
2
1
1
in vitro differentiated cells
adipocyte
2
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