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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 24ChIP-seq
  • 5DNase-seq
  • 3total RNA-seq
  • 1ATAC-seq
  • 1FAIRE-seq
  • 1Hi-C
Assay category
  • 24DNA binding
  • 7DNA accessibility
  • 3Transcription
  • 13D chromatin structure
Target of assay
  • 21histone
  • 21histone modification
  • 12broad histone mark
  • 9narrow histone mark
  • 3control
Date released
  • 80May, 2022
  • 61September, 2018
  • 52February, 2023
  • 35October, 2019
  • 33April, 2018
  • 33July, 2018
  • 32February, 2021
  • 29August, 2017
  • 26May, 2021
  • 20June, 2019
  • 19December, 2017
  • 19September, 2020
  • 16November, 2019
  • 13July, 2019
  • 7August, 2020
  • 6August, 2021
  • 6December, 2019
  • 6March, 2020
  • 6November, 2017
  • 6November, 2020
  • 5May, 2019
  • 5September, 2017
  • 3August, 2018
  • 3October, 2022
  • 2October, 2018
  • 1June, 2018
Available data
  • 32bam
  • 25bigWig
  • 21bed narrowPeak
  • 14bigBed narrowPeak
  • 4bed broadPeak
  • 4bigBed broadPeak
  • 3tsv
  • 2bed bed3+
  • 1hic
  • 1tar
Organism
  • 35Homo sapiens
Biosample type
  • 33primary cell
  • 2cell line
Organ
  • 86brain
  • 69limb
  • 47blood vessel
  • 47vasculature
  • 42nerve
  • 35epithelium
  • 30kidney
  • 26artery
  • 21eye
  • 21vein
  • 18pancreas
  • 8heart
  • 7liver
  • 4connective tissue
  • 4gonad
  • 4ovary
  • 2pituitary gland
  • 1adipose tissue
  • 1lymph node
  • 1skin of body
Project
  • 35AMP
Genome assembly (visualization)
  • 27hg19
  • 23GRCh38
Lab
  • 35AMP-T2D consortium
Audit category:
  • 1audit script error
  • 1inconsistent ontology term
BIOSAMPLE
ASSAY

35 results

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Clear Filters
ChIP-seq
DNase-seq
total RNA-seq
ATAC-seq
FAIRE-seq
Hi-C
primary cell
endothelial cell of umbilical vein17211
epithelial cell of proximal tubule7
kidney glomerular epithelial cell11
kidney tubule cell11
Liver fetal (hepatocyte)1
cell line
glomerular visceral epithelial cell11
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