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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 21ChIP-seq
  • 6total RNA-seq
  • 3DNase-seq
Assay category
  • 21DNA binding
  • 6Transcription
  • 3DNA accessibility
Target of assay
  • 8histone
  • 8histone modification
  • 7recombinant protein
  • 7transcription factor
  • 6control
  • 5narrow histone mark
  • 3broad histone mark
Date released
  • 130August, 2021
  • 81June, 2019
  • 47September, 2023
  • 30October, 2019
  • 23April, 2019
  • 14May, 2023
  • 11July, 2019
  • 8February, 2021
  • 5May, 2019
  • 3December, 2019
  • 2March, 2020
Available data
  • 28bam
  • 22bigWig
  • 16bed narrowPeak
  • 6tsv
  • 1bigBed narrowPeak
Organism
  • 30Homo sapiens
Biosample type
  • 15cell line
  • 11primary cell
  • 4tissue
Organ
  • 86brain
  • 69limb
  • 47blood vessel
  • 47vasculature
  • 42nerve
  • 35epithelium
  • 30kidney
  • 26artery
  • 21eye
  • 21vein
  • 18pancreas
  • 8heart
  • 7liver
  • 4connective tissue
  • 4gonad
  • 4ovary
  • 2pituitary gland
  • 1adipose tissue
  • 1lymph node
  • 1skin of body
Project
  • 30AMP
Genome assembly (visualization)
  • 22GRCh38
  • 22hg19
Lab
  • 30AMP-T2D consortium
Audit category:
  • 13inconsistent ontology term
BIOSAMPLE
ASSAY

30 results

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Clear Filters
ChIP-seq
total RNA-seq
DNase-seq
cell line
RCC 7860 HIF1a re-expression41
RCC 7860 HIF2a over-expression31
RCC 7860 vector31
glomerular visceral epithelial cell11
primary cell
epithelial cell of proximal tubule7
kidney glomerular epithelial cell11
kidney tubule cell11
tissue
kidney4
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