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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
2
ChIP-seq
2
DNase-seq
1
ATAC-seq
1
FAIRE-seq
1
Hi-C
Assay category
4
DNA accessibility
2
DNA binding
1
3D chromatin structure
Target of assay
histone
16
histone modification
9
broad histone mark
7
narrow histone mark
2
control
Date released
7
October, 2019
1
March, 2020
Available data
5
bam
3
bed narrowPeak
3
bigBed narrowPeak
3
bigWig
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
1
hic
1
tar
Organism
7
Homo sapiens
Biosample type
6
primary cell
1
tissue
Organ
26
limb
22
kidney
19
eye
18
nerve
14
blood vessel
14
epithelium
14
vasculature
11
pancreas
9
brain
8
artery
6
vein
3
connective tissue
heart
2
liver
1
adipose tissue
1
pituitary gland
1
skin of body
Project
7
AMP
Genome assembly (visualization)
4
hg19
2
GRCh38
Lab
7
AMP-T2D consortium
Audit category:
1
audit script error
organ_slims!
heart
target.investigated_as!
histone
BIOSAMPLE
ASSAY
7 results
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ChIP-seq
DNase-seq
ATAC-seq
FAIRE-seq
Hi-C
primary cell
endothelial cell of umbilical vein
2
2
1
1
tissue
islet of Langerhans
1
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