Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 186ChIP-seq
  • 21total RNA-seq
  • 20ATAC-seq
  • 7DNase-seq
  • 4pCHi-C
  • 2Hi-C
Assay category
  • 186DNA binding
  • 27DNA accessibility
  • 21Transcription
  • 23D chromatin structure
Target of assay
  • 156histone
  • 156histone modification
  • 124narrow histone mark
  • 32broad histone mark
  • 30control
Date released
  • 683February, 2021
  • 388August, 2017
  • 385May, 2021
  • 301August, 2021
  • 285May, 2020
  • 240October, 2019
  • 200May, 2022
  • 199February, 2023
  • 186June, 2019
  • 167July, 2018
  • 111November, 2017
  • 106May, 2019
  • 84July, 2019
  • 79April, 2019
  • 73September, 2018
  • 69October, 2018
  • 59September, 2020
  • 49April, 2018
  • 48March, 2020
  • 47September, 2023
  • 40May, 2024
  • 39February, 2018
  • 38November, 2019
  • 35December, 2017
  • 26November, 2018
  • 25February, 2020
  • 23October, 2017
  • 19April, 2020
  • 15May, 2023
  • 13January, 2021
  • 11September, 2017
  • 10November, 2020
  • 9January, 2019
  • 8January, 2018
  • 7August, 2020
  • 7December, 2018
  • 5March, 2019
  • 5March, 2023
  • 4August, 2018
  • 4October, 2022
  • 3December, 2019
  • 3June, 2018
  • 1August, 2022
Available data
  • 179bam
  • 150bigWig
  • 142bed narrowPeak
  • 49tagAlign
  • 47bigBed narrowPeak
  • 7tsv
  • 5bed bed3+
  • 5bed broadPeak
  • 5bigBed broadPeak
  • 2hic
  • 1bedpe bed3+
  • 1tagAlign bed3+
Organism
  • 240Homo sapiens
Biosample type
  • 220tissue
  • 16primary cell
  • 2cell line
  • 2in vitro differentiated cells
Organ
  • 80brain
  • 65limb
  • 42nerve
  • 25blood vessel
  • 25vasculature
  • 22artery
  • 21eye
  • 15epithelium
  • 15kidney
  • 5pancreas
  • 4connective tissue
  • 4gonad
  • 4ovary
  • 3vein
  • 2heart
  • 2pituitary gland
  • 1adipose tissue
  • 1liver
  • 1lymph node
  • 1skin of body
Project
  • 240AMP
Genome assembly (visualization)
  • 156hg19
  • 151GRCh38
Lab
  • 240AMP-T2D consortium
Audit category:
  • 4inconsistent ontology term
  • 1audit script error
replication_type!
  • isogenic
BIOSAMPLE
ASSAY

240 results

search-icontable-tab-icon
Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
DNase-seq
pCHi-C
Hi-C
tissue
islet of Langerhans2114134
tibial nerve35412
tibial artery1912
kidney4
superior frontal gyrus4
primary cell
epithelial cell of proximal tubule7
endothelial cell of umbilical vein111
kidney glomerular epithelial cell11
kidney tubule cell11
Heart fetal (cardiac muscle cell)1
cell line
Panc12
in vitro differentiated cells
adipocyte2
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego