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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 145ChIP-seq
  • 18total RNA-seq
  • 17ATAC-seq
  • 5DNase-seq
  • 4pCHi-C
  • 1Hi-C
Assay category
  • 145DNA binding
  • 22DNA accessibility
  • 18Transcription
  • 13D chromatin structure
Target of assay
  • 115histone
  • 115histone modification
  • 83narrow histone mark
  • 32broad histone mark
  • 30control
Date released
  • 672February, 2021
  • 355August, 2017
  • 253August, 2021
  • 251May, 2021
  • 198May, 2022
  • 197May, 2020
  • 190October, 2019
  • 156June, 2019
  • 152February, 2023
  • 123July, 2018
  • 111November, 2017
  • 106May, 2019
  • 78April, 2019
  • 72September, 2018
  • 68October, 2018
  • 59September, 2020
  • 48July, 2019
  • 47September, 2023
  • 40May, 2024
  • 38February, 2018
  • 37November, 2019
  • 32December, 2017
  • 24November, 2018
  • 19April, 2020
  • 16March, 2020
  • 16October, 2017
  • 15May, 2023
  • 11January, 2021
  • 10April, 2018
  • 9January, 2019
  • 9September, 2017
  • 8January, 2018
  • 7August, 2020
  • 7December, 2018
  • 6November, 2020
  • 4March, 2023
  • 3December, 2019
  • 2June, 2018
  • 1August, 2018
  • 1August, 2022
  • 1October, 2022
Available data
  • 136bam
  • 104bigWig
  • 102bed narrowPeak
  • 44bigBed narrowPeak
  • 9tagAlign
  • 5bed bed3+
  • 5bed broadPeak
  • 5bigBed broadPeak
  • 4tsv
  • 1hic
Organism
  • 190Homo sapiens
Biosample type
  • 176tissue
  • 12primary cell
  • 2cell line
Organ
  • 65limb
  • 48brain
  • 42nerve
  • 25blood vessel
  • 25vasculature
  • 22artery
  • 21eye
  • 11epithelium
  • 11kidney
  • 5pancreas
  • 4gonad
  • 4ovary
  • 3vein
  • 1connective tissue
  • 1liver
  • 1lymph node
  • 1pituitary gland
  • 1skin of body
Project
  • 190AMP
Genome assembly (visualization)
  • 108hg19
  • 107GRCh38
Lab
  • 190AMP-T2D consortium
Audit category:
  • 4inconsistent ontology term
  • 1audit script error
BIOSAMPLE
ASSAY

190 results

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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
DNase-seq
pCHi-C
Hi-C
tissue
islet of Langerhans2114134
tibial nerve35412
tibial artery1912
kidney4
superior frontal gyrus3
primary cell
epithelial cell of proximal tubule7
endothelial cell of umbilical vein111
Heart fetal (cardiac muscle cell)1
Liver fetal (hepatocyte)1
cell line
Panc12
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