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Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
145
ChIP-seq
18
total RNA-seq
17
ATAC-seq
5
DNase-seq
4
pCHi-C
1
Hi-C
Assay category
145
DNA binding
22
DNA accessibility
18
Transcription
1
3D chromatin structure
Target of assay
115
histone
115
histone modification
83
narrow histone mark
32
broad histone mark
30
control
Date released
672
February, 2021
355
August, 2017
253
August, 2021
251
May, 2021
198
May, 2022
197
May, 2020
190
October, 2019
156
June, 2019
152
February, 2023
123
July, 2018
111
November, 2017
106
May, 2019
78
April, 2019
72
September, 2018
68
October, 2018
59
September, 2020
48
July, 2019
47
September, 2023
40
May, 2024
38
February, 2018
37
November, 2019
32
December, 2017
24
November, 2018
19
April, 2020
16
March, 2020
16
October, 2017
15
May, 2023
11
January, 2021
10
April, 2018
9
January, 2019
9
September, 2017
8
January, 2018
7
August, 2020
7
December, 2018
6
November, 2020
4
March, 2023
3
December, 2019
2
June, 2018
1
August, 2018
1
August, 2022
1
October, 2022
Available data
136
bam
104
bigWig
102
bed narrowPeak
44
bigBed narrowPeak
9
tagAlign
5
bed bed3+
5
bed broadPeak
5
bigBed broadPeak
4
tsv
1
hic
Organism
190
Homo sapiens
Biosample type
176
tissue
12
primary cell
2
cell line
Organ
65
limb
48
brain
42
nerve
25
blood vessel
25
vasculature
22
artery
21
eye
11
epithelium
11
kidney
5
pancreas
4
gonad
4
ovary
3
vein
1
connective tissue
1
liver
1
lymph node
1
pituitary gland
1
skin of body
Project
190
AMP
Genome assembly (visualization)
108
hg19
107
GRCh38
Lab
190
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
1
audit script error
BIOSAMPLE
ASSAY
190 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
DNase-seq
pCHi-C
Hi-C
tissue
islet of Langerhans
21
14
13
4
tibial nerve
35
4
1
2
tibial artery
19
1
2
kidney
4
superior frontal gyrus
3
+ See 49 more…
primary cell
epithelial cell of proximal tubule
7
endothelial cell of umbilical vein
1
1
1
Heart fetal (cardiac muscle cell)
1
Liver fetal (hepatocyte)
1
cell line
Panc1
2
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