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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 101ChIP-seq
  • 30total RNA-seq
  • 22ATAC-seq
  • 10DNase-seq
  • 5Hi-C
  • 4pCHi-C
  • 1FAIRE-seq
Assay category
  • 101DNA binding
  • 33DNA accessibility
  • 30Transcription
  • 53D chromatin structure
Target of assay
  • 196histone
  • 196histone modification
  • narrow histone mark
  • 55broad histone mark
  • 39control
  • 7recombinant protein
  • 7transcription factor
Date released
  • 715February, 2021
  • 368November, 2017
  • 335May, 2021
  • 323August, 2017
  • 314May, 2020
  • 308August, 2021
  • 207June, 2019
  • 205February, 2023
  • 200May, 2022
  • 173October, 2019
  • 168July, 2018
  • 108July, 2019
  • 88November, 2018
  • 86May, 2019
  • 78December, 2017
  • 65October, 2018
  • 61March, 2020
  • 59September, 2020
  • 58September, 2018
  • 57April, 2019
  • 57November, 2019
  • 49April, 2018
  • 47September, 2023
  • 35December, 2018
  • 31February, 2018
  • 27January, 2019
  • 25February, 2020
  • 25May, 2024
  • 21October, 2017
  • 19April, 2020
  • 16January, 2021
  • 16November, 2020
  • 15May, 2023
  • 11September, 2017
  • 10December, 2019
  • 8January, 2018
  • 7August, 2020
  • 5March, 2019
  • 5March, 2023
  • 4August, 2018
  • 4October, 2022
  • 3June, 2018
  • 1August, 2022
  • 1July, 2025
Available data
  • 132bam
  • 90bigWig
  • 72bed narrowPeak
  • 50bigBed narrowPeak
  • 16tsv
  • 9bed broadPeak
  • 9bigBed broadPeak
  • 9tagAlign
  • 8bed bed3+
  • 4hic
  • 3bedpe bed3+
  • 1hdf5
  • 1tar
Organism
  • 173Homo sapiens
Biosample type
  • 113tissue
  • 27cell line
  • 25primary cell
  • 8in vitro differentiated cells
Organ
  • 56limb
  • 37blood vessel
  • 37vasculature
  • 34nerve
  • 26epithelium
  • 25kidney
  • 22artery
  • 19eye
  • 15pancreas
  • 15vein
  • 12brain
  • 6heart
  • 5liver
  • 3connective tissue
  • 1adipose tissue
  • 1pituitary gland
  • 1skin of body
Project
  • 173AMP
Genome assembly (visualization)
  • 98hg19
  • 88GRCh38
Lab
  • 173AMP-T2D consortium
Audit category:
  • 21inconsistent ontology term
  • 1audit script error
Audit category:
  • 1inconsistent assembly
target.investigated_as!
  • narrow histone mark
BIOSAMPLE
ASSAY

173 results

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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
DNase-seq
Hi-C
pCHi-C
FAIRE-seq
tissue
tibial nerve27412
islet of Langerhans14134
tibial artery1912
heart321
brain31
cell line
Panc11011
RCC 7860 HIF1a re-expression41
RCC 7860 HIF2a over-expression31
RCC 7860 vector31
glomerular visceral epithelial cell11
primary cell
endothelial cell of umbilical vein11211
epithelial cell of proximal tubule4
kidney glomerular epithelial cell11
kidney tubule cell11
Heart fetal (cardiac muscle cell)1
in vitro differentiated cells
cardiac precursors (cardiac muscle cell)111
cardiomyocytes (cardiac muscle cell)111
adipocyte2
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