Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
40
single cell RNA-seq
16
total RNA-seq
3
ATAC-seq
3
Hi-C
1
MPRA
Assay category
56
Transcription
3
3D chromatin structure
3
DNA accessibility
Date released
715
February, 2021
411
August, 2017
406
November, 2017
397
May, 2021
341
May, 2020
314
October, 2019
311
August, 2021
205
February, 2023
200
June, 2019
200
May, 2022
168
July, 2018
120
May, 2019
106
July, 2019
88
November, 2018
81
December, 2017
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
35
December, 2018
30
January, 2019
26
February, 2018
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
7
August, 2020
7
January, 2018
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
41
fastq
19
zippedFastqFolder
3
bedpe bed3+
3
bigWig
3
cool
3
hic
1
txt
Organism
62
Homo sapiens
Biosample type
62
primary cell
1
cell line
Organ
22
epithelium
22
pancreas
Project
62
HPAP
1
AMP
Genome assembly (visualization)
3
GRCh38
3
hg19
Lab
62
Klaus Kaestner, Upenn
1
AMP-T2D consortium
Audit category:
3
audit script error
organ_slims!
embryo
pericardium
ureter
BIOSAMPLE
ASSAY
63 results
search-icon
table-tab-icon
Clear Filters
single cell RNA-seq
total RNA-seq
ATAC-seq
Hi-C
MPRA
primary cell
Langerhans cell
40
pancreatic alpha cell
15
2
1
pancreatic beta cell
1
1
1
pancreatic acinar cell
1
cell line
MIN6
1
Download