Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 33chromatin state
  • 33target gene predictions
  • 32candidate regulatory elements
Date released
  • 98September, 2022
  • 46February, 2021
  • 7June, 2020
  • 6November, 2021
  • 5May, 2021
  • 3August, 2017
  • 3February, 2024
  • 2January, 2022
  • 2March, 2024
  • 1March, 2020
  • 1October, 2022
Available data
  • 65bed bed3+
  • 33bed bed9
Organism
  • 98Homo sapiens
Collection Tags
  • 98EpiMap
Biosample type
  • 86tissue
  • 12cell line
Organ
  • 225kidney
  • 210lung
  • 204musculature of body
  • 180brain
  • 164intestine
  • 151epithelium
  • 138limb
  • 120connective tissue
  • 108heart
  • 102skin of body
  • 99extraembryonic component
  • 98large intestine
  • 81embryo
  • 75bodily fluid
  • 75vasculature
  • 69blood
  • 69stomach
  • 60blood vessel
  • 57small intestine
  • 48placenta
  • 46liver
  • 44pancreas
  • 42adrenal gland
  • 42bone element
  • 42mammary gland
  • 39prostate gland
  • 39ureter
  • 33thymus
  • 30penis
  • 27eye
  • 24adipose tissue
  • 24gonad
  • 24lymph node
  • 24spinal cord
  • 21artery
  • 21esophagus
  • 18spleen
  • 15lymphoid tissue
  • 12mouth
  • 12ovary
  • 12testis
  • 12thyroid gland
  • 12uterus
  • 9nerve
  • 9skeleton
  • 6breast
  • 6bronchus
  • 6lymphatic vessel
  • 6tongue
  • 6urinary bladder
  • 6vagina
  • 6vein
  • 3bone marrow
  • 3nose
Project
  • 98AMP
Genome assembly (visualization)
  • 98hg19
  • 33GRCh38
BIOSAMPLE
TYPE

98 results

search-icontable-tab-icon
Clear Filters
chromatin state
target gene predictions
candidate regulatory elements
tissue
large intestine131312
sigmoid colon555
transverse colon444
colonic mucosa222
mucosa of rectum222
muscle layer of colon222
rectum smooth muscle tissue111
cell line
HCT116111
HT-29111
SW480111
colon epithelial cell111
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego