Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Embedding Matrix
Click or enter search terms to filter the experiments included in the matrix.
Embeddings type
35
Gene expression
9
Accessible chromatin
Date released
31
May, 2022
2
August, 2021
2
July, 2025
2
October, 2024
2
September, 2021
1
February, 2021
1
March, 2023
1
March, 2024
1
November, 2021
1
September, 2023
Available data
40
h5ad
6
mtx
4
tsv
3
rds
1
bed bed3
1
cloupe
1
tbi
Organism
40
Homo sapiens
Biosample type
38
tissue
7
primary cell
Organ
8
pancreas
5
musculature of body
3
blood
3
bodily fluid
3
lung
2
bone element
2
connective tissue
2
epithelium
2
intestine
2
kidney
2
mouth
1
adipose tissue
1
bone marrow
1
eye
1
large intestine
1
liver
1
lymph node
1
mammary gland
1
prostate gland
1
skin of body
1
small intestine
1
spleen
1
thymus
1
tongue
1
trachea
1
uterus
1
vasculature
Project
37
AMP
2
LungMap
2
T1D
2
community
1
ENCODE
Genome assembly (visualization)
1
hg19
Encyclopedia version
1
fusion_consented.snatac.h5ad
1
fusion_consented.snrna_post_decontx.h5ad
organ_slims!!
kidney
tissue_term_name!
heart
BIOSAMPLE
TYPE
44 results
search-icon
table-tab-icon
Clear Filters
Gene expression
Accessible chromatin
tissue
islet of Langerhans
2
4
pancreas
3
1
lung
2
1
kidney
2
peripheral blood mononuclear cell
1
1
+ See 23 more…
primary cell
islet of Langerhans
1
1
pancreas
1
1
peripheral blood mononuclear cell
1
1
cell
1
endothelial cell
1
+ See 3 more…
See all biosamples