Experiment Matrix

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BIOSAMPLE

	ASSAY
3939 results Clear Filters	ChIP-seq	total RNA-seq	ATAC-seq	single cell RNA-seq	DNase-seq	RNA microarray	snATAC-seq	WGBS	pCHi-C	Hi-C	RRBS	small RNA-seq	MeRIP-seq	FAIRE-seq	GRO-seq	STARR-seq	Capture-C	CRISPR genome editing followed by DNA sequencing	snDrop-seq	HiChIP	...and 8 more
tissue
islet of Langerhans	34	292	68	6	1		7		4	3	1		4	1
liver	103	167	20	1	2			3	1	1	1	1
kidney	17	49	75	64	13		6			1	1			1
bone element						84
heart left ventricle	26	3	2	18	3			4	1	1	1
bone tissue		58
body of pancreas	29	3	4		4			2				2
left cardiac atrium	25			18	1
coronary artery	3	1	36		2
heart	10	4		1	18			1		1		1
tibial nerve	27	5	1		2
brain	16	1	1		14						1
heart right ventricle	9	1		17	1			2	1	1
pancreas	12	2			2		4	2	1	1	1			1
skeletal muscle tissue	15	1	1	1			2				4	1
right cardiac atrium	4			18				1	1
spleen	18		1		1			2	1
tibial artery	19	1	1		2
retina		3	15		3
lung				9			10		1
muscle of leg	5				13			1
aorta	9	1		4				2	1	1
muscle of arm					17
right lobe of liver	8	3	1		2			1				2
ascending aorta	12	2			1
layer of hippocampus	15
thoracic aorta	12	2	1
pigmented layer of retina		2	12
right atrium auricular region	8	3	1		2
caudate nucleus	10	1			1
temporal lobe	10	1										1
renal cortex interstitium					11
substantia nigra	10	1
endocrine pancreas	10
germinal matrix	10
renal pelvis					10
right kidney					10
cingulate gyrus	9
left kidney					9
middle frontal area 46	9
angular gyrus	8
cerebellum (Hemisphere)	2	1	1		1							1
frontal cortex		2			2							1		1
gastrocnemius medialis		1								4
psoas muscle		2							1	2
aortic valve				4
left renal cortex interstitium					4
left renal pelvis					4
pulmonary valve				4
right renal pelvis					4
tricuspid valve				4
Ammon's horn		1			1				1
cardiac atrium		1		2
cardiac ventricle		1		2
mitral valve				3
occipital lobe		1			1							1
putamen	1	1			1
right renal cortex interstitium					3
acetabular part of hip bone		1	1
cerebellum		2
diencephalon		1										1
ilium		1	1
interventricular septum				2
ischium		1	1
metanephros		1										1
parietal lobe		1										1
pubis		1	1
pulmonary artery				2
thymus									2
C1 segment of cervical spinal cord		1
adrenal gland									1
amygdala		1
anterior cingulate cortex		1
bladder (urinary bladder)									1
central medial thalamic nucleus	1
cerebellar cortex					1
distal epiphysis			1
distal epiphysis of femur			1
distal epiphysis of humerus			1
distal epiphysis of tibia			1
dorsolateral prefrontal cortex									1
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))		1
esophagus									1
forelimb muscle					1
gastric (mucosa of stomach)									1
globus pallidus					1
gyrus rectus	1
hindlimb muscle					1
hypothalamus		1
inferior parietal cortex					1
kidney (Cortex-Medulla)																			1
kidney (cortex)																			1
kidney (medulla)																			1
kidney interstitium						1
left ventricle myocardium		1
medial globus pallidus	1
medulla oblongata					1
midbrain					1
middle frontal gyrus					1
nucleus accumbens		1
occipital pole	1
ovary									1
pericardium											1
pons					1
posterior cingulate cortex			1
primary motor cortex	1
proximal epiphysis			1
proximal epiphysis of femur			1
proximal epiphysis of humerus			1
proximal epiphysis of tibia			1
renal glomerulus						1
secondary auditory cortex	1
sigmoid colon									1
small intestine									1
superior temporal gyrus					1
white matter	1
primary cell
pancreatic alpha cell	9	52	35	12				31		1
Langerhans cell				85			48
monocyte	44	54	15						1
pancreatic beta cell	9	21	23	12				16		1
exocrine cell		39
CD8-positive, alpha-beta T cell	23	4	2						1
pancreatic acinar cell	4	4	9	12						1
naive thymus-derived CD4-positive, alpha-beta T cell	1	1	22						1
pancreatic ductal cell	6	4	4	10
CD4-positive, alpha-beta memory T cell			22
endothelial cell of umbilical vein	11				2					2				1
skeletal muscle myoblast	9	1			2						1
macrophage			11						1
pancreatic delta cell				11
pancreatic endocrine cell	11
epithelial cell of proximal tubule	6	1			1						1
hepatocyte	2	5			1						1
osteoblast		5	2		1				1
pancreatic cell				9
pancreatic polypeptide-secreting cell				9
peripheral blood mononuclear cell							8
cardiac fibroblast	3				3						1
kidney epithelial cell	4	1			1						1
skeletal muscle satellite cell	5	1										1
mesenchymal cell				6
B cell		2	2						1
mesenchymal stem cell	5
naive B cel		2	2						1
naive thymus-derived CD8-positive, alpha-beta T cell		2	2						1
T follicular helper cell		2	2
T-helper 1 cell		2	2
T-helper 17 cell		2	2
T-helper 2 cell		2	2
astrocyte of the cerebellum	2				1					1
brain microvascular endothelial cell	2				1					1
cardiac muscle cell	2				1						1
central memory CD8-positive, alpha-beta T cell		2	2
choroid plexus epithelial cell	2				1						1
effector CD4-positive, alpha-beta T cell		2	2
effector T cell		2	2
effector memory CD8-positive, alpha-beta T cell		2	2
gamma-delta T cell		2	2
kidney tubule cell		1			3
mature natural killer cell		2	2
memory B cell		2	2
memory T cell		2	2
memory regulatory T cell		2	2
naive regulatory T cell		2	2
pancreatic stellate cell				4
regulatory T cell		2	2
retinal pigment epithelial cell	2				1						1
gabaergic neuron			3
glutamatergic neuron			3
kidney glomerular epithelial cell		1			2
microglial cell/astrocyte			3
neutrophil	1	1							1
oligodendrocyte			3
renal cortical epithelial cell		1			1						1
skeletal muscle cell	1				1						1
CD4-positive, alpha-beta T cell									2
brain pericyte					1					1
cerebellar granule cell				2
co-expressing pancreatic endocrine cell				2
endothelial cell				2
enteroendocrine cell				2
glomerular endothelial cell		1			1
glomerular visceral epithelial cell					2
immature natural killer cell		1	1
mast cell				2
myeloid dendritic cell		1	1
natural killer cell		1	1
pancreatic epsilon cell				2
plasma cell		1	1
plasmacytoid dendritic cell		1	1
unclassified exocrine cell				2
unclassified pancreatic endocrine cell				2
Heart fetal (cardiac muscle cell)			1
Liver fetal (hepatocyte)			1
Purkinje cell				1
activated CD4-positive, alpha-beta T cell									1
adult endothelial progenitor cell									1
alternatively activated macrophage									1
astrocyte of the hippocampus					1
cardiac atrium fibroblast		1
cardiac ventricle fibroblast		1
chondrocytes										1
embryonic stem cell		1
endothelial cell of coronary artery		1
endothelial cell of hepatic sinusoid										1
erythroblast									1
hepatic stellate cell					1
inflammatory macrophage									1
kidney capillary endothelial cell					1
megakaryocyte									1
mesangial cell		1
pericardium fibroblast		1
smooth muscle cell of the brain vasculature					1
smooth muscle cell of the coronary artery		1
cell line
HepG2	369	14	1					1	2	2						2
EndoC_BH1	9	33	19							1			6				2	3		2
smooth muscle cell of the coronary artery	6	52	8
GM12878	59		1
Panc1	10				1					1
H1-hESC		8
RCC 7860 HIF1a re-expression	4	1
RCC 7860 vector	3	1							1
RCC 7860 HIF2a over-expression	3	1
EndoC-BH1
HEK293T																2
early embryonic cell		2
glomerular visceral epithelial cell		1			1
iPSC derived cell line	2
MCF-7									1
MIN6
RCC 7860 VHL									1
Synthesized DNA																1
fibroblast cell line									1
in vitro differentiated cells
adipocyte	51	5	8		1												1
cardiomyocytes	3	59
embryonic stem cell	29	7	6						1
neural progenitor cell	14	7	10
cardiac precursors (cardiac muscle cell)		19	1							1
pancreatic endoderm	12	4													1
cardiomyocytes (cardiac muscle cell)		3	1	2					2	2
hepatocyte	10
definitive endodermal cell	6	2													1
induced pluripotent stem cell		9
primitive gut cell	6	2													1
Pancreatic progenitors (progenitor cell of endocrine pancreas)			5
Posterior foregut	4														1
chondrocyte			5
endocrine cell	2	2
immature adipocyte		2	2
posterior foregut	2	2
lymphocyte of B lineage (iPSC)		1							1	1
Hepatic endoderm	2
osteoblast			1														1
pancreatic PP cell	2
preadipocyte		1	1
Progenitor cell of Hypothalamus (neural progenitor cell)			1
cardiac fibroblast		1
endothelial cell		1
hematopoietic multipotent progenitor cell		1
intermediate cardiomyocytes		1
intermediate endothelial cell		1
intermediate smooth muscle cell		1
islet precursor cell		1
mesodermal cell (lineage marker-negative)		1
mesodermal cell (pacemaker intermediate)		1
neuron cell of Hypothalamus (neuron)			1
smooth muscle cell		1
stem cell		1
stem cell
hESC	2														1
SB Ad3.1
mesenchymal stem cell									1
mesendoderm									1
neural progenitor cell (neural stem cell)									1
trophoblast									1

Experiment Matrix

Assay

Assay category

Target of assay

Date released

Available data

Organism

Biosample type

Organ

Project

Genome assembly (visualization)

Lab

Audit category:

Audit category:

Audit category:

organ_slims!

target.investigated_as!

3939 results