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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2440target gene predictions
  • 1666candidate regulatory elements
  • 919chromatin state
  • 684gene expression
  • 484differential activity
  • 397accessible chromatin
  • 178eQTL
  • 141variant allelic effects
  • 74Fine-mapped variants
  • 74binding sites
  • 25caQTL
  • 7sQTL
  • 4variant to gene
  • 3meQTL
  • 3pQTL
  • 2other
  • 1representative DNase hypersensitivity sites
Date released
  • 2430September, 2022
  • 1461July, 2026
  • 1001February, 2021
  • 320May, 2026
  • 291February, 2024
  • 286September, 2023
  • 239May, 2021
  • 155May, 2020
  • 128March, 2020
  • 111November, 2021
  • 102January, 2022
  • 82October, 2022
  • 79August, 2021
  • 70March, 2023
  • 64February, 2020
  • 40May, 2024
  • 35May, 2022
  • 33August, 2017
  • 29March, 2024
  • 28January, 2021
  • 24January, 2020
  • 21July, 2025
  • 19April, 2020
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 7February, 2023
  • 5October, 2019
  • 4March, 2026
  • 2January, 2018
  • 2January, 2025
  • 2November, 2019
  • 1August, 2020
  • 1August, 2022
  • 1February, 2025
  • 1July, 2020
  • 1November, 2020
Available data
  • 4891bed bed3+
  • 915tsv
  • 846bed bed9
  • 112txt
  • 90bigWig
  • 40bigBed bed9
  • 34bed bed9+
  • 26csv
  • 7bigBed narrowPeak
  • 1bam
Organism
  • 7054Homo sapiens
Collection Tags
  • 2430EpiMap
  • 935ENCODE-rE2G
  • 921ENCODE
  • 569DGA
  • 393HDMA
  • 320pyxis
  • 281KPMP
  • 260AMP
  • 252T1D
  • 150GTEx
  • 1464DN
  • 146T2DKP
  • 141 T2DKP
  • 133CATlas
  • 101T2D
  • 101eQTLCatalogue
  • 98BLUEPRINT
  • 55HPAP
  • 26FNIH_projects-heart
  • 24CMDGA
  • 12FNIH_projects-liver
Biosample type
  • 2999tissue
  • 2750primary cell
  • 1048cell line
  • 299in vitro differentiated cells
  • 4stem cell
Organ
  • blood
  • 2845vasculature
  • 2818blood vessel
  • 2789bodily fluid
  • 2655vein
  • 805brain
  • 698kidney
  • 681epithelium
  • 451heart
  • 419lung
  • 387connective tissue
  • 342musculature of body
  • 324intestine
  • 256skin of body
  • 246pancreas
  • 220limb
  • 206large intestine
  • 191liver
  • 180embryo
  • 158extraembryonic component
  • 132adipose tissue
  • 131stomach
  • 111muscle organ
  • 95adrenal gland
  • 94eye
  • 94small intestine
  • 89thymus
  • 88placenta
  • 85uterus
  • 83mammary gland
  • 78bone element
  • 69ureter
  • 67artery
  • 67prostate gland
  • 60__MARKER__
  • 60spleen
  • 56gonad
  • 51penis
  • 46spinal cord
  • 45thyroid gland
  • 44esophagus
  • 40lymph node
  • 30ovary
  • 26testis
  • 22nerve
  • 21lymphoid tissue
  • 20mouth
  • 16skeleton
  • 15lymphatic vessel
  • 14breast
  • 12pituitary gland
  • 12urinary bladder
  • 12vagina
  • 11bronchus
  • 11tongue
  • 7bone marrow
  • 3nose
  • 1embryonic structure
  • 1gallbladder
  • 1pericardium
Project
  • 6637AMP
  • 281KPMP
  • 111ENCODE
  • 32T1D
  • 19LungMap
  • 17community
  • 5ITG
Genome assembly (visualization)
  • 4321hg19
  • 2825GRCh38
  • 4hg18
organ_slims!
  • blood
software_used.software.name!
  • macs
BIOSAMPLE
TYPE

7102 results

search-icontable-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
chromatin state
gene expression
differential activity
accessible chromatin
eQTL
variant allelic effects
Fine-mapped variants
binding sites
caQTL
sQTL
variant to gene
meQTL
pQTL
other
representative DNase hypersensitivity sites
tissue
heart383721412
stomach42401911
head of caudate nucleus86
muscle of arm3333161
kidney282916711
primary cell
fibroblast2831024261
endothelial cell1739258223
macrophage13321710832
smooth muscle cell18211711222
common myeloid progenitor, CD34-positive142713
cell line
A5493321181
HeLa-S359531
H1-hESC391181
MCF-713951
H91571
in vitro differentiated cells
hematopoietic multipotent progenitor cell1019101
neural progenitor cell6547
adipocyte7461
cardiomyocytes11
endodermal cell442
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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