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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 1332target gene predictions
  • 971histone modifications
  • 916chromatin state
  • 887accessible chromatin
  • 852candidate regulatory elements
  • 801binding sites
  • 662gene expression
  • 179eQTL
  • 159differential activity
  • 132variant allelic effects
  • 73Fine-mapped variants
  • 10caQTL
  • 7sQTL
  • 5hQTL
  • 5pQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2451September, 2022
  • 1737February, 2021
  • 386May, 2021
  • 362February, 2024
  • 330November, 2021
  • 285June, 2020
  • 266September, 2023
  • 144May, 2020
  • 127August, 2021
  • 116March, 2020
  • 103January, 2022
  • 99October, 2022
  • 78January, 2020
  • 66March, 2023
  • 59February, 2020
  • 56January, 2021
  • 49May, 2022
  • 44November, 2022
  • 40May, 2024
  • 34August, 2017
  • 29March, 2024
  • 29March, 2025
  • 28February, 2023
  • 17April, 2020
  • 12October, 2019
  • 11November, 2019
  • 9August, 2018
  • 8April, 2019
  • 8May, 2019
  • 4February, 2025
  • 3November, 2020
  • 3September, 2018
  • 2January, 2018
  • 2January, 2025
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1June, 2021
Available data
  • 5140bed bed3+
  • 885tsv
  • 842bed bed9
  • 523bigWig
  • 108txt
  • 34bed bed9+
  • 32bigBed bed9
  • 26csv
  • 16bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 6954Homo sapiens
Collection Tags
  • 2442EpiMap
  • 1831ChIP-Atlas
  • 616DGA
  • 527AMP
  • 418T1D
  • 403T2DKP
  • 261KPMP
  • 219BLUEPRINT
  • 174 T2DKP
  • 1744DN
  • 135GTEx
  • 122ENCODE
  • 108T2D
  • 98eQTLCatalogue
  • 96CMDGA
  • 63HPAP
  • 33STARNET
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12ROADMAP
Biosample type
  • 2247primary cell
  • 2198cell line
  • 2125tissue
  • 426in vitro differentiated cells
  • 4stem cell
Organ
  • 2887vasculature
  • 2837bodily fluid
  • 2828blood
  • blood vessel
  • 2654vein
  • 906epithelium
  • 568kidney
  • 440connective tissue
  • 416brain
  • 302musculature of body
  • 266pancreas
  • 250lung
  • 231intestine
  • 223heart
  • 196limb
  • 185embryo
  • 163skin of body
  • 154liver
  • 138large intestine
  • 120extraembryonic component
  • 100eye
  • 91stomach
  • 88adipose tissue
  • 78bone element
  • 78uterus
  • 75artery
  • 73mammary gland
  • 66small intestine
  • 64prostate gland
  • 60placenta
  • 59adrenal gland
  • 49lymph node
  • 46penis
  • 46ureter
  • 41gonad
  • 40thymus
  • 35esophagus
  • 35spinal cord
  • 25spleen
  • 22lymphatic vessel
  • 22nerve
  • 21testis
  • 20lymphoid tissue
  • 19ovary
  • 19thyroid gland
  • 17skeleton
  • 15mouth
  • 14bronchus
  • 13pituitary gland
  • 12bone marrow
  • 10breast
  • 9urinary bladder
  • 8tongue
  • 8vagina
  • 5trachea
  • 4nose
  • 1pericardium
Project
  • 6316AMP
  • 330ENCODE
  • 261KPMP
  • 60T1D
  • 17LungMap
  • 13community
  • 5ITG
Genome assembly (visualization)
  • 6025hg19
  • 1835GRCh38
  • 4hg18
organ_slims!
  • blood vessel
software_used.software.name!
  • encode-ccres
BIOSAMPLE
TYPE

7002 results

search-icontable-tab-icon
Clear Filters
target gene predictions
histone modifications
chromatin state
accessible chromatin
candidate regulatory elements
binding sites
gene expression
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
sQTL
hQTL
pQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
primary cell
monocyte286181154121
CD8-positive, alpha-beta T cell530143
endothelial cell7115329122
common myeloid progenitor, CD34-positive141313
B cell1086112
cell line
HeLa-S355331
A549191181182
H1-hESC39111128
K5622317162
EndoC_BH11181831
tissue
heart20121519132
kidney1421610141711
stomach2111931911
brain163182161121
lung17161611
in vitro differentiated cells
neural progenitor cell51541047
hematopoietic multipotent progenitor cell1011011011
adipocyte6164211
embryonic stem cell11561
cardiomyocytes11
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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