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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 26ChIP-seq
Assay category
  • 26DNA binding
Target of assay
  • 1016histone modification
  • 1015histone
  • 513narrow histone mark
  • 501broad histone mark
  • 463transcription factor
  • 337control
  • 104RNA binding protein
  • 89recombinant protein
  • 26chromatin remodeller
  • 5nucleotide modification
  • 5other context
  • 5other post-translational modification
Date released
  • 15November, 2017
  • 5November, 2018
  • 3August, 2017
  • 3December, 2017
Available data
  • 26bam
  • 26bed narrowPeak
  • 26bigWig
  • 26fastq
  • 24bigBed narrowPeak
  • 5bed broadPeak
  • 5bigBed broadPeak
Organism
  • 26Homo sapiens
Biosample type
  • 20cell line
  • 3in vitro differentiated cells
  • 2tissue
  • 1primary cell
Organ
  • 23liver
  • 10blood
  • bodily fluid
  • 2connective tissue
  • 1epithelium
Project
  • 26AMP
Genome assembly (visualization)
  • 26hg19
  • 24GRCh38
Lab
  • 26AMP-T2D consortium
Audit category:
  • 2inconsistent control
Audit category:
  • 6missing controlled_by
Audit category:
  • 13inconsistent control read length
  • 8inconsistent control run_type
organ_slims!
  • bodily fluid
BIOSAMPLE
ASSAY

26 results

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ChIP-seq
cell line
HepG220
in vitro differentiated cells
adipocyte2
hepatocyte1
tissue
liver2
primary cell
skeletal muscle myoblast1
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