Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
39
ChIP-seq
Assay category
39
DNA binding
Target of assay
939
histone modification
938
histone
481
narrow histone mark
474
transcription factor
457
broad histone mark
308
control
104
RNA binding protein
89
recombinant protein
34
chromatin remodeller
5
nucleotide modification
5
other context
5
other post-translational modification
Date released
17
November, 2017
10
November, 2018
6
January, 2019
3
December, 2017
2
December, 2018
1
August, 2017
Available data
39
bam
39
bed narrowPeak
39
bigBed narrowPeak
39
bigWig
39
fastq
6
bed broadPeak
6
bigBed broadPeak
Organism
39
Homo sapiens
Biosample type
32
cell line
5
tissue
1
in vitro differentiated cells
1
primary cell
Organ
25
liver
10
blood
10
bodily fluid
3
spleen
connective tissue
1
epithelium
Project
39
AMP
Genome assembly (visualization)
39
hg19
37
GRCh38
Lab
39
AMP-T2D consortium
Audit category:
3
inconsistent control
Audit category:
6
missing controlled_by
Audit category:
11
inconsistent control read length
8
inconsistent control run_type
organ_slims!
bone element
connective tissue
BIOSAMPLE
ASSAY
39 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
cell line
HepG2
22
GM12878
10
tissue
spleen
3
liver
2
in vitro differentiated cells
hepatocyte
1
primary cell
skeletal muscle myoblast
1
Download