Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Embedding Matrix
Click or enter search terms to filter the experiments included in the matrix.
Embeddings type
49
Gene expression
10
Accessible chromatin
Date released
29
May, 2022
8
June, 2025
6
April, 2025
3
February, 2025
2
August, 2021
2
October, 2024
2
September, 2021
1
February, 2021
1
February, 2023
1
March, 2023
1
March, 2024
1
November, 2021
1
September, 2020
1
September, 2023
Available data
45
h5ad
11
rds
7
tsv
6
mtx
Organism
55
Homo sapiens
Biosample type
54
tissue
6
primary cell
Organ
9
pancreas
7
musculature of body
connective tissue
5
adipose tissue
5
liver
5
vasculature
4
artery
4
blood vessel
4
heart
3
blood
3
bodily fluid
3
kidney
3
lung
2
epithelium
2
intestine
2
mouth
1
bone element
1
bone marrow
1
brain
1
eye
1
large intestine
1
lymph node
1
mammary gland
1
prostate gland
1
skin of body
1
small intestine
1
spleen
1
thymus
1
tongue
1
trachea
1
uterus
Project
52
AMP
2
LungMap
2
T1D
2
community
1
ENCODE
organ_slims!
connective tissue
software_used.software.name!
cellranger-atac
BIOSAMPLE
TYPE
59 results
search-icon
table-tab-icon
Clear Filters
Gene expression
Accessible chromatin
tissue
islet of Langerhans
2
4
heart
5
liver
4
1
pancreas
4
1
artery
3
1
+ See 24 more…
primary cell
islet of Langerhans
1
1
pancreas
1
1
peripheral blood mononuclear cell
1
1
cell
1
endothelial cell
1
+ See 2 more…
See all biosamples